Jatrophihabitans sp. GAS493: SAMN05892883_2587
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Entry
SAMN05892883_2587 CDS
T11165
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat00300
Lysine biosynthesis
jat00470
D-Amino acid metabolism
jat01100
Metabolic pathways
jat01110
Biosynthesis of secondary metabolites
jat01120
Microbial metabolism in diverse environments
jat01230
Biosynthesis of amino acids
Module
jat_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMN05892883_2587
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMN05892883_2587
Enzymes [BR:
jat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAMN05892883_2587
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
SOD73295
UniProt:
A0A286EQV4
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All DBs
Position
I:2730401..2731807
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AA seq
468 aa
AA seq
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MSRSAHPAGPRHADVLPESSGFGLPSDVHDLDPEIWPASIERVDGELRLAGRRLTDLVAE
YGTPAFFMDEADVRGRARAYAAAFDGADVYYAGKAFLCTQLARWIEAEGLNLDVCTGGEL
AIALAADFPPHRLALHGNNKSVAELTRAVDVGVGSIVVDSFDEIERLARIAQAAGVRQRV
LIRVTVGVEAHTHEFIATAHEDQKFGFSLKGGDALRGAQAVIEAESLELIGLHSHIGSQI
FDTAGFEVAAHRVVGLAREIRDLTGVEVELLNLGGGLGIAYVSGDEPQPAKEIADRLSEI
VDRESAAAGLTRPRLAVEPGRAIVGPSAITVYQVGTIKPVVINDQLTRNYISVDGGMSDN
IRTALYDAAYTVTLANRVSTAELVRSRVVGKHCESGDIVVRDAWLPADVAPGDLLAVAAT
GAYCRSMASNYNQVPRPPVIGVCAGQTSVLLRRETEDDLLRLDPGWTK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtccgcccaccctgctggtcctcggcacgcggacgtgctgcccgagtcatcg
gggttcggccttccctccgacgtccacgacctcgacccggagatctggccggcgtcgatc
gaacgcgtcgacggcgaactacggttggccggtcggcggctcaccgatctcgtcgctgag
tacggcacgccggctttcttcatggacgaggccgacgtgcgcgggcgggcccgggcctat
gccgccgccttcgacggtgccgatgtgtactacgccggcaaggcgtttctctgcacccaa
ctggctcgctggatcgaggccgaggggctcaacctcgacgtctgcacgggtggcgagctg
gcgatcgcgctggccgccgatttcccgccgcatcggctcgcgctgcacggcaacaacaag
agcgtcgctgagctgacgcgagccgtcgacgtcggagtcggcagcatcgtcgtcgattcc
ttcgacgagatcgagcggctggcccggatcgcgcaagcggccggggtccggcagcgggtg
ctgattcgcgtcaccgtcggcgtcgaggcgcacacccacgaattcatcgccaccgcccac
gaggaccagaagttcgggttctcactcaagggtggggacgcgctgcgtggggcccaggcg
gtcatcgaggcggagtccctggaactgatcggactgcactcccacatcggatcgcagatc
ttcgacactgccggcttcgaagtggccgcccaccgtgtcgtcgggttggcccgggagatc
cgcgatctcaccggcgtcgaggtcgagctgctcaatctcggtggcggcctcggcatcgcg
tatgtcagtggcgacgagccgcagccggccaaggagatcgccgaccggttgagcgagatc
gtcgaccgcgagtcggccgcggcggggttgacccgcccccggctggccgtcgagcccggt
cgggcgatcgtggggccgagtgcgatcaccgtctaccaggtgggcactatcaagccggtt
gtcatcaatgatcagctgacccgaaactacatctcggttgacggcggtatgagtgacaac
atccggacggctctctacgacgccgcctacaccgtcacgctggccaatcgggtctcgacg
gctgagctcgttcgcagccgggtcgtcggaaagcactgcgaaagtggggacattgtcgtg
cgggatgcgtggttgccggccgacgtcgcccccggtgatctgttggcggtggccgctacc
ggtgcctactgccgaagtatggccagtaattacaaccaagttccgcgcccaccggtgatc
ggtgtgtgtgcgggccagacctccgtgctgctgcggcgcgagaccgaggacgatctactt
cgtctggatccagggtggaccaaatga
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