Jatrophihabitans sp. GAS493: SAMN05892883_2727
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Entry
SAMN05892883_2727 CDS
T11165
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMN05892883_2727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_2727
Enzymes [BR:
jat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAMN05892883_2727
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMN05892883_2727
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMN05892883_2727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
SOD73435
UniProt:
A0A286ER86
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All DBs
Position
I:2888053..2888943
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AA seq
296 aa
AA seq
DB search
MPELPEVETVRAGLERWIVGRTIESVEVSHPRAVRRHLPGAVDFSSRLAGRTVARVRRRG
KYLWLELADSDLCVVGHLGMSGQLLIQPPEAPDERHLHVRVRFTDSGSQLRFVDQRTFGG
LMLDELRPAVDLAGDTVPGQISHIARDPLDPALDEAALRRRMRARSSAIKRTLLDQSILS
GVGNIYADESLWRSRLHPEQLTSRLNAPQFQRLLSDVRDVLNESLVAGGTSFDSLYVNVN
GESGYFDRTLNAYGREDEPCRRCGTAIRRVSFMNRSSFFCPACQRTPRRVPGPARG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaagttgagaccgttagagccggacttgaacgctggatcgtcggt
cgcacgatcgagagtgtcgaggtctcccaccctcgcgcagtgcgccgtcatcttcccggc
gcagtcgatttctcctctcgtctggccggccggacggtggcgcgagtgcgccggcgcggc
aagtacctctggctggagctggccgactccgatctctgcgtggtcggccatctcggtatg
agtggtcaactgctcatccagccacccgaagccccggacgagcggcacctgcatgttcga
gtgcgcttcaccgactccggatcgcagctgcgcttcgtcgatcagcggaccttcggcggc
ctcatgttggacgagctgcggccggcggtcgatctggccggcgacacggtgccgggccag
atctcccacatcgctcgggatccgcttgacccggccctggatgaggcggcgctgcgccgg
cggatgcgtgcccgcagcagcgccatcaagcgcaccctgctcgaccagagcatcctctcc
ggcgtcgggaacatctacgccgacgagtcgctctggcgttctcgtctgcacccggagcag
ctcacctcccggttgaacgccccgcagtttcaacggctgctgagcgacgtacgggacgtg
ctcaacgagtcgctcgtggccggcggaacttcgttcgactccctctacgtgaacgtcaac
ggagagagtggctacttcgatcgcacgctgaacgcctacggtcgcgaggatgagccgtgc
cggcgctgtgggaccgcgatccggcgggtgtcgttcatgaaccgctccagtttcttctgc
ccggcctgtcagcggacgcccagacgcgtgccgggaccggcccgcggctga
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