Jatrophihabitans sp. GAS493: SAMN05892883_2792
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Entry
SAMN05892883_2792 CDS
T11165
Name
(GenBank) DNA helicase/exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMN05892883_2792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_2792
Enzymes [BR:
jat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SAMN05892883_2792
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMN05892883_2792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
SH3_13
CbiA
SLFN-g3_helicase
Glyco_hydro_4C
SRP54
AAA_28
MeaB
NTPase_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
SOD73498
LinkDB
All DBs
Position
I:2980058..2981971
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AA seq
637 aa
AA seq
DB search
MTNVIATRGRGLLKTFNEAGVLTAADVHVASRLGALAREADDRVLLAIALVVRGTRHGSV
VLDLADAAQTIVADADQEEVEPAPHLDWPALDEWVAACTTSPLVTGTAGGPPLQMVASRL
WLDRYWRQEAQVADDLLRRSADRPSDLDLAVLRQDLSSLFAEADEPDQRLAAAVAALSRV
SVIGGGPGTGKTTTVARLITVLSRQLGPGLRVALAAPTGKAAARLEEAVHSAEGPLTAED
RASLARLSASTLHRLLGWRPGVSSRFRHDHENRLPYDVVVVDESSMVSLTLMARLLEALA
PATRLVLVGDPDQLASVEAGAVLGDLVDQDDVGPATASFRTSLAQATDGVPADVRAEAPG
AMLRESVALLRTVHRFDAGGPIAQLAEHVRAGRADDALALLRAQPPGLAFFETAEDEAIT
STALAAVVDRVVAYESAVIDAARAGDVTQALDALERHRLLCAHRAGPRGVRWWTDLIERR
LALDLRVTPRPDGRYAGQPLLVTSNDYETGLYNGDTGVVIREGDELAAAFRRGGEPIVLP
LARLSDVRPLHAMTVHRGQGSQFDVVTVLLPLALSPLATRQTLYTAITRAADEVRLVGSA
DSVLACVQRQAARATGLRDRLAGPLTPVATTRSREQT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacgtgatcgcgacgcgggggagggggctgctgaagacgttcaacgaggctgga
gtgctgacggcggccgacgtacacgtggcctcgcggctcggggctctggcacgcgaggcc
gacgatcgtgtgctactcgccattgcgctcgtcgtgcgtggaacgcggcacggttcggtg
gtgctcgatctggccgacgcggcccagacgatcgttgcggatgcggaccaggaggaggtc
gagcccgctccgcacctcgactggcctgctctggacgagtgggtggcggcctgcacgacg
agcccgctcgtcaccgggacagccggcggcccgccactgcagatggtggcgtcgcggctg
tggctcgaccggtactggcggcaagaggcgcaggtggccgacgacctgctgcgccgcagt
gccgaccgcccgtccgacctcgatcttgcggttttgcgacaggacctctcatcgctcttc
gcggaggcggacgaaccggatcagcggctcgcggcggcggttgcagcgctgtcgcgggtg
agtgtgatcggtggtgggccaggcaccggcaaaacgacgacggtggcccggctgatcacc
gtgctgagccgccagctcgggcccgggctccgggtcgcgctggcagcgccgaccggcaag
gcggcggcccggctggaggaggcagtgcactcggcggaggggccgctgaccgcagaggat
cgcgcgtcgctggcgcggctgtcggcctcgacgctgcaccgcttgttgggttggcggccc
ggggtgtcaagccggttccggcacgaccacgagaaccgactgccgtatgacgtggtagtc
gtcgatgagagctcgatggtgtcactgacgctgatggcccggctgctcgaagcgcttgcg
cccgcgacccggctggtgctggtaggcgatcccgatcagctcgcctcggtagaggccggg
gcagtgctcggcgacctcgtcgaccaggacgacgttggaccagcgaccgcttcgtttcgt
acctcgctcgcgcaagcgaccgacggcgtcccggccgacgttcgtgcggaggcccccggt
gccatgctgcgcgagtccgtggccctgcttcggaccgtccaccggttcgacgccggcggc
ccgatcgcgcaactcgctgagcacgtccgtgccggccgggcggacgacgcgctcgcgctg
ctacgggcccagccacccggtctcgcgttcttcgagacggccgaagacgaggccatcact
agcaccgcgctcgccgcggtcgtcgatcgcgtcgtggcctacgagagtgcggtgatcgac
gcagcccgggccggcgacgtgacgcaggcgctggacgccctcgagcggcaccggctgtta
tgcgcccaccgggccgggccgcgtggcgtgcggtggtggaccgatctcatcgagcgccgg
ttggctctcgatctgcgcgtgaccccgcgtcccgacggccgctacgccgggcagccgctg
ctggtgacgtcgaacgactacgagaccggcctctacaacggcgacactggcgtggtgatc
cgggagggagacgaactggccgccgcgttccgccgcggtggcgagcccatcgtgctgccg
ctcgcccggttgtcggacgtccgcccattgcatgccatgacggtgcatcgtgggcagggc
agccagttcgacgtcgtgacggtgctgctgccgctcgcgttgtcgccgctagctacccga
cagaccctctacaccgcgatcacgcgggcggcggacgaggtgcggctcgtcggatcggcc
gattccgtgctcgcctgcgtgcaacgtcaggctgcccgggcgaccggccttcgggatcgg
ttagccggaccgctcactccagtggcgacgacgaggagccgagagcaaacgtga
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