Jatrophihabitans sp. GAS493: SAMN05892883_3569
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Entry
SAMN05892883_3569 CDS
T11165
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03030
DNA replication
jat03430
Mismatch repair
jat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMN05892883_3569
03430 Mismatch repair
SAMN05892883_3569
03440 Homologous recombination
SAMN05892883_3569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jat03032
]
SAMN05892883_3569
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_3569
Enzymes [BR:
jat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMN05892883_3569
DNA replication proteins [BR:
jat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMN05892883_3569
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMN05892883_3569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
SOD74385
LinkDB
All DBs
Position
I:3807567..3809369
Genome browser
AA seq
600 aa
AA seq
DB search
MISVRFVSSTTAPAFIQTSLDDLDETLQQTTFTVVDLETTGGRAGTDAITEFGAVRVRGG
VVLGEFQSLVDPGIGISPFVSVLTGITDSMVIGAPPAGEVLLSFLEFARGSTLVAHNAPF
DVGFLRAAADAGQIPWPAFPVLDTAVLARRVLTRDEVPNCKLSTLAAYFHATTTPVHRAL
ADARATVDVLHGLIARLGNIGVQTLPDLKAFTSKVSDAQRRKRHLADGLPTSPGVYIFRD
ERGEPLYVGTSRNIRSRVRQYFLASETRSRMGEMVGLAARVDPVECSHPLEAQVRELRLI
AAHKPRYNRRSKFPERQVWLKLTEEAYPRLSIVREVSDDNARYLGPLRTQRQAEAIRDAI
HDAVPLRQCSDRLSLRRRVRAACTLAGIGRCCAPCEGEVSPAGYAELADLVALAWSGDAR
PLIEPLQLKVEQLSTAQRYEHAGVVRDRMAIVVRACARMQRIGSLTRIEQLVAAAPDGSG
GWELCVVSHGRLTAAGVAVRGRSPWEVIEALLTNAEAVRPGPGPLPAALAEETECVLRWL
EQPLTRLVQTSQAWSHPAFGAGSLTLAGYANEGQANDRRRREMDPFADRRRLPLLSRPAR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgattagcgtccgattcgtgagttcgacaacagcccccgcgttcatccagaccagcctc
gacgatcttgacgagacgcttcagcagaccaccttcaccgtcgtcgatctggagaccacc
ggcggccgggccggcaccgatgccatcaccgagttcggtgccgtgcgcgtacggggtggc
gtcgtgctcggggagtttcagtcgctggtcgaccccggcatcggtatcagtccgtttgtc
agtgtgctcaccggcatcaccgactcaatggtgatcggggcgcctccggccggcgaggta
ctgctctccttcctcgagttcgcccgcggaagcacactggtcgcccacaacgcgccgttc
gacgtcggctttctgcgcgcggccgccgacgccggacagatcccctggccagcctttcca
gtactcgacacagccgtactggctcgtcgagtgctgactcgggatgaggtacccaactgc
aagctctccacactggcggcctacttccacgcaaccacgacgccggttcaccgcgcgctg
gccgacgctcgcgccaccgtcgacgtcctccacgggctgatcgctcggctcgggaacatc
ggcgtccagacgctgcctgacctcaaggccttcactagcaaggtctccgacgcgcagcgc
cggaagcggcacctggccgacggccttcctacctcgcctggcgtttacatcttccgcgac
gagcgcggcgagccgctctacgtcgggaccagtcgaaacattcgctcgcgggtgcggcag
tacttcctggccagcgagacgcgaagccggatgggcgagatggtcggcttagcggcccgc
gtcgatccggtggagtgcagccatccgctcgaagcccaggtgcgggaactgaggctgatc
gctgcccacaagccgcgctacaaccgccgatcgaagttcccggaacgtcaggtctggttg
aagttgaccgaggaggcctacccccgtctgtccatagtccgcgaggtaagcgacgacaat
gcccgctacctcggaccgctgcgtacccagcggcaggccgaagcgatccgagacgcaatc
cacgacgcggttccgttacgacaatgcagcgaccgcctctcgctgcgccgtcgggtgcgg
gccgcgtgcacactggccgggataggtcgctgctgcgccccctgtgaaggtgaggtcagc
ccggccggctacgccgagttggccgatctggtcgcgctcgcctggtccggtgacgcccgc
ccgctaatcgagccgctccagctgaaggtggagcaactgtcgacggcccagcgttacgaa
catgccggtgttgtccgtgatcggatggcgatcgtggtccgcgcctgtgctcgcatgcag
cgaatcggttcgctcacccgcatagagcaattagtggcggccgcccccgacggctcggga
ggttgggagctctgcgtcgtcagccacggtcgtctcaccgctgcgggggtagcggtgcgg
ggcagatcaccatgggaggtgatcgaagccctgctaaccaacgccgaggcggtacgtccc
gggcccggcccactgccggccgccttggccgaggagaccgaatgtgtcctgcgctggcta
gaacagccgcttacccggctcgtgcagacgtcgcaggcctggtctcaccccgcgttcggg
gccggatcgctcacgctggccggctacgccaatgagggccaggccaatgaccgccgccga
cgcgaaatggaccccttcgctgaccgccggcggcttccgttgctgagccgaccggcgcgg
tga
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