Jatrophihabitans sp. GAS493: SAMN05892883_4031
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Entry
SAMN05892883_4031 CDS
T11165
Name
(GenBank) exodeoxyribonuclease-3
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMN05892883_4031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_4031
Enzymes [BR:
jat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMN05892883_4031
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMN05892883_4031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
SOD74838
LinkDB
All DBs
Position
I:complement(4356748..4357614)
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AA seq
288 aa
AA seq
DB search
MRIATWNVNSIKQRMPRFLPWLDERQPDIVCLQETKLNDAAIAELLDDELAARGYQGAYY
GQAQWNGVALLSKVGLDDVVRGIPGAPGFPDPEARAISGTCGGIRVHSLYVPNGRSVGSD
HYEYKLAWLAALREDVAEGPDAALVCGDMNIAPTDADVFDPGAYVDQTHVTAPERAALGE
LLKLGLHDVVRERWPDEKVFSYWDYRAGMFHQNLGMRIDLVLASPPVAGRTVAAWIDRQA
RKGTGPSDHAPVIVDLDEAPDGDIGPMVPPPSAARGAKKTIKLPQSRH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatagcgacctggaacgtcaactcgatcaaacagcgcatgccgagattcctgccg
tggctggacgaacggcagccggacatcgtctgcctgcaggagacgaagctgaacgacgca
gcaatcgcggagctcctcgacgacgagctggccgctcgcggctatcagggcgcctactac
gggcaggcgcagtggaacggcgtggcgctgctgtccaaggtcggcctcgatgacgtcgtc
cgtggcatccccggcgcgccgggtttccccgatccggaggcccgggccatctccggcacc
tgcggcggcatccgcgtgcattcgctctacgttccgaacggtcgcagcgtcggctccgat
cactacgagtacaagctggcctggctcgcggctctgcgggaggacgttgcggagggtcct
gatgctgcactcgtctgcggcgacatgaacatcgctccgaccgatgccgacgtcttcgac
ccgggggcctacgtcgaccagacccatgtcaccgcaccggagcgggcagcgctgggagaa
ctgctgaagctgggcctgcatgacgtcgtgcgcgagcgctggccggacgagaaggtcttt
agctactgggattaccgggctggaatgttccatcagaacttgggaatgcgcatcgacctg
gttctggcctcacccccggtcgccggacggaccgtggcggcctggatcgaccggcaggcc
cgcaaggggaccgggccgagtgaccacgcgccggtgatcgtcgacctggatgaggcaccg
gacggcgatatcgggccgatggtgccaccaccgtcagcggctcgcggcgcaaagaagacg
atcaagcttccgcaatctcgccactga
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