Jatrophihabitans sp. GAS493: SAMN05892883_4032
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Entry
SAMN05892883_4032 CDS
T11165
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMN05892883_4032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_4032
Enzymes [BR:
jat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAMN05892883_4032
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMN05892883_4032
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMN05892883_4032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
SOD74839
UniProt:
A0A286EVN0
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Position
I:4357679..4358497
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AA seq
272 aa
AA seq
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MPELPEVESARSVIERAALHRVIVDVDDSDTYECRPHSPGEIRSALLGRSLTVAHRQGKS
MWCDTSGVGRSKSPGPTLGIHLGMSGKIVIADGQGSEVDGGDYWERGRAAGDYRFSRFSL
AFADGGRLLLIDPRRLGRVRLDPPVERLGPDARQITGPQFRAMLARGSAPVKARLLDQEA
VAGIGNLLADQALWLAKLNPSRPVNTLDRSETDRLYRAVRRAVGAAIDGGGVHTLSIIPF
RTHDAHCPRCGSVMKRGTVGGRTTWWCAREQA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactacctgaggtcgagtccgcccgcagcgtcatcgaacgggccgcgttgcat
cgcgtgatcgtcgacgtggacgattcggacacctacgaatgccgcccgcactcgccggga
gagatccgcagcgcgctcctgggccgcagcctgacggtcgcccatcgccaaggcaagagc
atgtggtgtgacacctccggcgtcggccggtcgaagtcgcccggtccgaccttggggatc
cacctcggcatgtcgggcaagatcgtcatcgccgacggccagggcagcgaggtcgacgga
ggcgactactgggagcgcggacgggcggccggcgactaccgattctcccgcttttcattg
gcgttcgccgacggtggccgactgctactcatcgacccgcgccgcctgggacgggttcgt
ctcgatccacccgtcgagcgcctcggaccggacgcccgccagatcaccggcccgcagttt
cgcgccatgctggctcggggcagcgcgccggtgaaggcgcggctgctcgatcaggaggcg
gtcgccggcatcggcaacctgctggccgatcaggccctctggctggccaagctcaacccg
tcccgtccggtgaacacgctggatcgttccgagaccgaccgtctctaccgggcggtgcgt
cgcgcagttggtgcggccatcgacggcggcggcgtgcacacactctcgatcattccgttc
cgcacgcatgatgcgcactgcccgcggtgcggatcggtcatgaaacgcgggacggtgggc
ggccgcaccacctggtggtgtgcccgcgagcaggcgtga
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