Jatrophihabitans sp. GAS493: SAMN05892883_4140
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Entry
SAMN05892883_4140 CDS
T11165
Name
(GenBank) PKD domain-containing protein
Organism
jat Jatrophihabitans sp. GAS493
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Gene cluster
GFIT
Motif
Pfam:
PKD_4
Big_9
PKD
Cadherin_5
Cadherin_4
K319L-like_PKD
DUF4114
Cadherin_3
Motif
Other DBs
NCBI-ProteinID:
SOD74946
UniProt:
A0A286EVM4
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All DBs
Position
I:complement(4480077..4485257)
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AA seq
1726 aa
AA seq
DB search
MRLLNRHVCVSKRTLAVITCLSLVAAMFTAQVVHAPRSSAGLYGPVPSDEGGDPTLDFTD
NNALFVYVRSDTAGGRACVIAATGDDWSCDSPAPGWKRATHLIGIGTQWDLLQGPYLPIG
QFRIGVENSQDVPLEASEVFSVESCGDTCSTALADSVVADAKAAAAQLNFDMNGMCTING
LLEKVAGKATGMRGFSKDIKAPKVVYTDLPFVGTVVTGIGFGVAFTIEDPFTANINKALD
ILKDLSCQTAKMYQDIANDPPDAGFAAVAAPVFATIPSSSPSTLNDLLQSVDRQRAFGIA
MLHGYERFQGAEAADNVAGQRRQLNATGQFGTDLARELETSAQRLRAYADVAAADPELSK
PAIEPSEFDDLNTLYQRITASGFTAAETANFHSFGYTDTQIAAIRTHFGQDIGAAGATEP
FPEALRTLADQLETEIDPIQAFATSALVEAGRLDVPPTAGFTATLVSGRTYNFQSTGAST
DGDSIVSRDWDFGDGETASGASVIHTFTDDGYYPVTHTVSEATRSNSSNQLIAVGPKPNR
APVAVRDDVSTTSNHAVTIDVLGNDSDPDGDTLRIVSSTDGSGGPVTCGAATCVYTPGSV
TGTDVFTYTIADPAGATATAQVVVHVGASAFVGPSAGLSASTQSGDGPLFVLFDASSSID
EDGTITSYEWDFGDGATGSGATASHTYTKVGQFIATVTVSDEHGRSAMASTIIAVTTKGN
LPPTVSLAGNTTTGIAQLEMPFSANANDPDSSVEAVAWTFGDGGTATGTTVNHTYQKPGQ
YQLTVTATDDHGATGTDKLVVTVYPAANHQPQPEPENVTTDKGTAVTIPVLENDVDPDGD
PLTVTGNGAAQSGTANCAADGTCIFTPDAGFEGSTSFTYDVSDGNSEPVTEVVGITVVHR
DGYPTAVAHVDPAHGFVPMGSTLDASDSIAASGTIVSYRWSLSDGFTSTAATTSHLLSTP
GALTGTLTVTDTAGHSDTTTITLDATDAADLQLPFCGDQDDVNDPLVPQCRAYTRLPDVQ
TWQVTGSGAVDVTFDWIDRDASNSNELVAFNVDDALGTIDGARPGTKAWYDGVLSRSQTI
FPGGSNAFSPNVTVPYPAGTYLAFFIVSASLTDLPAIPSWQNQAFFSITSANSDSTDHME
GYSNAAGQLTEFGFEDLYGGGDRDFNDVVYTMHGAVRPVGTLSASLSASTDTVVAGAALQ
YTASISNQARTSTSVNSVSVTLPAGFSYQSGTSSGLTSNDPEVAGRTLTWSGPFVLDAVT
AGTERFTVKASQVPGTYSSSDDANAGALTVTPSGPSAAVTVTAAPTPTPTPTPTPTPTPT
PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT
PTPTPTPTPTPTPTPTPTPTPTPTPTTTPTPNPTPVNHAPTATGQSVTVTAGGALPITLS
ATDPDDDQLTYSVTSGPLHGSLTGAGPSVIYTPAPGYSGTDSFTFTANDGQLTSSAATVT
IAVNPASTSCANTAPTLDTTASTDQRTAARKLRSDPFSTNEPNELILAFVAADGPRAPNQ
QITRVSGGGLTWTLATRSNSTWGTTEVWQAYAPTKLKNVRVVAQLANAGFDGMITLASFA
HSAASIGTTAAAAGTTGTPTDTLSTPTCGSLVWAVGHDWTHSQRPTPPPGQSLVHTFVDG
RIRDSFWTQTMEEPTTAATSTLTTNGIHDDRWTMVAVEIPPSAAPR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgctgaacaggcacgtctgcgtatccaagcgcacgctggcagtgatcacctgt
ctctcgctggtggccgcgatgttcaccgcgcaggtggtgcacgcgccgcggtcctcagcc
ggactgtacggaccggtcccctccgacgaggggggcgacccgaccctcgacttcaccgac
aacaacgcgctcttcgtctacgtccgatccgacaccgcgggcggacgggcctgcgttatt
gccgccaccggcgatgactggagttgtgattcgccggcaccgggctggaagcgggccact
cacctcatcggcatcggaacccagtgggacctgcttcagggaccgtacctaccgatcggg
cagttccggatcggcgtcgagaacagccaggacgttccgctcgaagcgagtgaggtcttc
tccgtcgaatcttgtggggacacctgctcgaccgcgctcgctgacagcgtcgtggccgac
gcgaaggccgccgccgcgcaattgaatttcgacatgaacggcatgtgcacgatcaacgga
ctgctcgagaaggtcgccggcaaagcaactggcatgcgcggattctccaaggacatcaag
gctccgaaggtcgtctacaccgaccttccgttcgtgggaactgtcgtcaccggcatcggg
ttcggagtcgccttcaccatcgaggatccattcaccgccaacatcaacaaggcactggac
attctcaaggatctctcctgccagacggcgaagatgtaccaggacatcgccaacgatccg
ccggacgcgggcttcgccgcggtggctgcgccggtcttcgcgaccattccgtcaagtagc
ccgtccaccctgaacgatctgctgcaatcagttgataggcaaagggcattcggtatcgcg
atgctgcatggctatgaacgtttccagggcgccgaggccgccgataacgtagccggccag
cgccggcaactgaacgccaccgggcagttcggcaccgatctggcccgcgagttggagacc
agcgcacagcggctgcgggcctacgccgacgtcgccgcggctgaccccgagctctccaag
ccggccatcgagccgagtgagttcgacgatctgaacacgctctaccaacggatcaccgcc
agtgggttcaccgccgccgagacggccaacttccattccttcggctacaccgacacccag
atcgcggcgatccgcacccacttcggccaggacatcggcgcggccggagcgaccgagccc
ttccctgaggcgttgcgcacgctggccgaccagctcgaaaccgagatcgatccgattcaa
gccttcgcgacgagcgccctggtcgaggccgggcgtctcgacgtccccccgaccgcgggt
ttcaccgcgaccctggtcagcggccgaacctacaacttccaatcgaccggggcttcgacc
gacggcgatagcatcgtgtcccgcgactgggatttcggcgacggcgagaccgcgtcgggc
gcctccgtgattcacaccttcacagacgacggctactacccagtcacccacaccgtctcc
gaggccacccggtccaactcaagcaatcagttgatcgccgtcggtcccaagcccaaccgg
gcgccggtcgcggtccgcgatgacgtgtcgacgacgagcaatcacgcagtgacgatcgac
gtgctgggcaatgactccgaccccgacggcgacacgctgcgaatcgtctcctcgaccgac
ggctcgggaggccccgtcacctgtggagcggcaacctgcgtctacaccccgggatcggtg
accggcaccgacgtcttcacttacacgattgccgatccggccggcgcgactgccaccgca
caagttgtggtccacgtcggggcctccgccttcgtcggtccgagcgctggtctgtccgcc
tccacccagagcggtgacggaccactcttcgtgctgttcgacgcgtcgtcctccatcgac
gaggacggcacgatcacctcttacgaatgggacttcggtgatggtgccaccggcagtggg
gccacagccagccacacctacacgaaggtggggcagttcatcgcgaccgtcacggtgagc
gacgagcacggtcgcagcgcgatggccagcaccattatcgccgttaccacaaaggggaat
ctgccgccgaccgttagtctggccggcaacaccacgacgggcatcgcccagctggagatg
ccgttctcggccaacgcgaatgatcccgattccagcgtggaggccgtcgcctggacgttc
ggcgacggtggcaccgcgaccggtacgacggtgaaccacacctatcagaaaccggggcag
tatcagctgaccgtgactgccaccgatgaccacggtgcgaccgggaccgacaagctggtc
gtgaccgtgtacccggccgccaaccaccaaccccagccggagcctgagaacgtcacgacc
gacaagggcactgcggtgacgattccggtgctggagaacgacgtcgatcctgatggtgac
ccgttgaccgtcaccggcaacggcgccgcccagtccggcaccgccaactgcgcggctgac
gggacctgcatcttcacccccgacgccggtttcgaggggagcacgagtttcacctacgac
gtcagtgacggcaacagcgaaccggtgactgaagtcgtcggaatcacggtggtgcaccgc
gatggctatccgaccgcggtcgctcacgtcgacccggcccacggcttcgtgccgatggga
tcaacgctggacgcgagcgattccatcgccgccagcggcacgatcgtcagctaccggtgg
agcctgagcgacgggttcacgagcacggcggcaaccacctcgcacctgctgtcgacaccg
ggagcgctcaccgggaccctgaccgtgaccgatacggcgggtcattcggacaccacaacc
atcaccctcgacgccactgacgccgccgacctgcagttaccgttctgcggcgaccaggac
gacgtgaacgatcccttggtacctcagtgtcgcgcctacacccgcctgcccgatgtgcag
acctggcaggtcaccggctccggcgcggtggacgtcaccttcgattggatcgaccgcgac
gcgagcaacagtaacgagttagtcgccttcaatgtggacgatgcacttggcacgatcgac
ggtgctcggccggggacgaaggcctggtacgacggggtcctgagccggtcgcagacgatc
ttcccgggcggatcgaatgccttcagcccgaacgtcacggtgccttatccggccgggacg
tacctcgcgttcttcatcgtctccgcttcactgaccgacctaccggcaattccgagctgg
cagaaccaggcgttcttctcgatcacctcggccaactcggacagcaccgatcacatggag
gggtacagcaacgcggctggtcagctgaccgagttcggtttcgaggatctctacggcggt
ggcgaccgggacttcaacgacgtcgtgtacacgatgcacggcgcggtgcgtccggtggga
acgctgtcggccagcctgtctgcctcaaccgacacggtggtcgcgggagcggcgttgcag
tacacggcgagcatctcgaatcaggcccggacctcgacaagcgtcaatagcgtctcggtg
acgttgccggccgggttcagctatcagagcggcacgtcgtccggactcaccagcaacgat
ccggaggtggctgggaggactctcacctggagcgggcccttcgtactggatgcggtgacc
gcgggcaccgaacggttcaccgtcaaggcctcacaggttccgggcacgtactccagctcg
gacgacgcgaacgccggtgccctcaccgtcacaccctccgggccgagcgcggcggtcacg
gtcaccgcagcaccgacaccgactcccacaccgacgccgacaccgacgccgacgccgacg
ccgactccgacgccgactccgacgccgactccgactccgacgccgactccgacgccgact
ccgacgccgactccgactccgacgccgactccgacgccgacaccgactcccacaccgaca
ccgacaccgactcccacaccgacaccgactcccacgccgactcccacaccgacaccgact
cccacaccgacaccgacaccgactcccacgccgacaccgactcccacaccgacaccgaca
ccgactcccacgccgacaacgacaccgacaccgaatcccacacccgtgaatcacgccccg
acggcgaccgggcagtccgtcacggtgaccgccggaggcgcgctgccaatcactctctcc
gcgaccgatccagacgatgatcagctcacatacagcgtcaccagcgggccgctgcatggc
agcctgaccggcgccgggccgagtgtcatctacacaccggcgccgggctactccggcacc
gattcctttactttcacggcgaatgacggccagctgaccagctcggcggcgacagtcacg
atagcggtgaacccggcgtcgacgagctgtgcgaacaccgcgccgactctcgacacgacg
gcatcgaccgatcagcggaccgccgcgcggaagttgcgctccgatccattcagcacgaat
gaacccaacgagttgattctggcgttcgtcgccgccgacgggccgcgggcgccgaaccag
cagatcaccagggtgagcggcgggggactgacctggacgctggccacgcgctccaactcc
acctggggcacgaccgaggtttggcaggcctacgcgccgacgaaactgaagaacgtcagg
gttgtggcgcagttggccaacgccgggttcgacggcatgatcacgctcgcctcattcgcg
cactccgccgccagcatcggcacgaccgcggcggccgcgggaaccaccggaacaccgacg
gacaccctgagcacgccgacctgcggttcgctggtctgggccgtcggccatgactggacg
cactcgcagcggccgacgccaccgcccggtcagtctctggtgcacactttcgtggacggg
cggattcgcgactcgttctggacccagacgatggaggagccgaccaccgccgccacgagc
acacttaccaccaacggcatccacgacgatcggtggacgatggtggcggtcgagatccct
ccctcagcggcaccgagatga
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