Jatrophihabitans sp. GAS493: SAMN05892883_4309
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Entry
SAMN05892883_4309 CDS
T11165
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
jat Jatrophihabitans sp. GAS493
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_4309
Enzymes [BR:
jat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAMN05892883_4309
DNA repair and recombination proteins [BR:
jat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAMN05892883_4309
Prokaryotic type
SAMN05892883_4309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
SOD75104
LinkDB
All DBs
Position
I:complement(4754051..4755394)
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AA seq
447 aa
AA seq
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MWFRRDLRVADHPALLAAAQDGPVTALFVLDDALLRPAGAPRLAFLLQTLRALQADLSER
GGQLVVRRGEPAEVVGQVAREVGAVAVHVSSDHAPYGSARDARVEAALGGIPLIRTGSPY
GVTPGRVRKADGSPFKVYSAFYRRWVEHGWPAPAQTEAAGIDWAPAIKSVAIPDDPPLDP
GLTLPPAGEAAAVRAWANFAAERLADYDTARDRPDQDATSHLSPHLHVGSIHPRTLLQGL
GRSTSAERFRRELAWRDFYASVLHFWPASAREYFQPELAAMPYRRGKAAATALAAWQQGR
TGYPIVDAGMRQLLAEGWMHNRVRMIVASFLVKDLHIEWTEGARHFMRHLIDGDLASNQH
GWQWTAGSGTDASPYFRIFNPTTQGRRFDPQGDYIRRYVPQLRSFGAREIHEPGASAQGL
PEGYPAPIVDHARERAVSLADYKRLRG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttcggcgcgatctgcgggtggctgaccatccggcactgctggccgccgcccag
gacgggccggtgaccgcgctcttcgtcctggacgacgcactgctgcggccggccggcgcc
ccacggttagcttttctgctccagacgctgcgggcgttgcaggccgatctgagtgagcgc
ggcgggcagctggtggtgcggcgcggcgaaccggccgaggtcgtggggcaggtggctcgt
gaggtgggcgcggtcgcggtccacgtcagctccgaccacgcgccctacgggtcggcccgc
gacgctcgggtcgaggcagcgctgggcggtatcccgttgatccgcaccggatcgccgtac
ggcgtcacaccggggcgggtcaggaaggccgacggcagcccgttcaaggtctactcggcc
ttctatcggcgctgggtcgagcacggctggccggcgccggcccagacggaggcggccggc
atcgactgggccccggcgatcaaaagcgtcgccatcccggacgatccaccgctggacccg
ggcctcaccctcccaccggccggagaggccgccgcggtgcgggcatgggccaacttcgcc
gccgagcgactcgcggactacgacaccgcccgcgaccgtcccgaccaggacgccacctcg
cacctgtcgccgcacctgcacgtcgggagcatccatccgcgcaccctgctgcaggggctg
ggccgctccaccagcgcggagcgattccggcgggagctggcctggcgggacttctacgcc
tccgtgctgcacttctggcccgcgagcgcgcgcgagtacttccagcccgagttggcggcg
atgccctaccggcgcggcaaggcggccgcgaccgcgctggcggcgtggcagcagggtcgg
accggctacccgatcgtcgatgccggaatgcgccagttgctggccgaggggtggatgcat
aaccgggtgcggatgatcgtcgcgtcgttcctggtgaaagacctgcatatcgaatggacc
gaaggcgcccgccacttcatgcgtcacctcatcgacggggacctggccagcaatcagcac
ggatggcagtggacggccgggagtggcaccgatgcctcgccctacttccggatcttcaat
ccgaccacccaggggcgtcgcttcgacccgcagggcgactacattcgccgctacgtgccg
cagctgcgctccttcggggcgcgcgagattcacgagcccggcgcgtcggcccagggactg
cccgaggggtacccggcaccgatcgtcgaccacgcccgggagcgggcggtgtcgctggcc
gactacaagcgcctgcgcggttag
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