Antarcticirhabdus aurantiaca: OXU80_00175
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Entry
OXU80_00175 CDS
T09604
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OXU80_00175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_00175
02044 Secretion system [BR:
jav02044
]
OXU80_00175
Transporters [BR:
jav02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
OXU80_00175
Secretion system [BR:
jav02044
]
Type I secretion system
Multiple protein transporter
OXU80_00175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_33
AAA_29
AAA_18
AAA_13
nSTAND1
PRK
AAA_30
Mg_chelatase
AAA_16
Adeno_IVa2
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WAJ28708
LinkDB
All DBs
Position
38323..40068
Genome browser
AA seq
581 aa
AA seq
DB search
MLRRAFAVCKSNFLFVVLFSFFINLLMFVSPLYMIQVYDRVLASRNEVTLVMVTILAVAL
LVVYAVLESIRSRVLVRTGARFDKFIGESVFKTSFRGHLRAPGGGYSQPIRDLDTLREFL
TGGGIITFCDAPWMPIFLAVCFMIHFWIGVVALIGAIAIFALALANELATRRHLKEASTA
SIGANQYVSTTLRNAEIVHALGMMGAISRRWNDLHDRALGLQARASDRAGTILAMSKFTR
TVLQTAILGVGAWLVLESEVSPGAMIASSIMMGRALAPVEGAVAQWKGFVAARSAYDRLG
KMFASTEAEPERMRLPAPTGAISLEQLVVAPPGSRIATLKSVSMQIQPGEVIGVIGPSGA
GKSTFARALTGVWPPLSGHVRLDGADIDNWHAELLGPHIGYLPQDVELFAGTIAENIARF
SEIDAEQVVAAARKAGVHEMILQLPDGYNTRIGEGGRALSGGQRQRIGLARALYGDPKIV
ILDEPNSSLDSNGEAALAQALRTAKAEGRTVLVISHRASLLNEVDKLAVFTGGTLTMYGP
TRDVMARLNAGTGSGAAAPAAAVANSAQPMGQVTHMTRASG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcagggctttcgcggtctgcaagagcaatttcctcttcgtcgtcctgttcagc
ttcttcatcaacctcctgatgttcgtcagcccgctctacatgatccaggtctatgaccgg
gtcctggcgagccgcaacgaagtcaccctggtcatggtgacgatcctggccgtggcgctg
ctcgtggtctacgcggtgctggagtcgatccgctcgcgcgtcctggtgcggaccggcgcg
cgcttcgacaagttcatcggcgagagcgtcttcaagacgtccttccgcggccatctgcgc
gcgccgggcggcggctactcgcagccgatccgcgacctcgacacgctgcgcgagttcctc
accggcggcggcatcatcaccttctgcgacgcgccctggatgccgatcttcctggccgtc
tgcttcatgatccacttctggatcggcgtcgtcgcgctgatcggtgcgatcgcgatcttc
gcgcttgcgctcgccaacgagctcgccacccgccgccacctgaaggaagcctccaccgcc
tcgatcggtgccaaccagtacgtttcgacgacgctgcgcaacgccgagatcgtccacgcg
ctcggcatgatgggggcgatcagccggcgctggaacgacctccacgaccgcgccctcggg
ctccaggcccgggcgagcgaccgcgccggcacgatcctggccatgtcgaagttcacccgc
accgtgctccagaccgcgatcctgggcgtcggcgcctggctcgtcctggagtcggaggtt
tcgcccggcgcgatgatcgcctcctccatcatgatgggccgcgccctcgcgccggtggaa
ggggccgtcgcgcagtggaagggcttcgtcgccgcacgttcggcctatgaccgcctgggc
aagatgttcgcctccaccgaggccgagccggagcgcatgcgcctgcccgcgcccaccggc
gcgatcagcctcgagcagctcgtcgtcgctcctcccggctcgcgcatcgcgacgctgaag
agcgtcagcatgcagatccagccgggcgaggtgatcggcgtgatcggcccctcgggcgcc
ggcaagtcgaccttcgcgcgcgccctcaccggcgtctggccgccgctgtcgggccatgtt
cgcctcgacggcgcggacatcgacaactggcacgccgagcttctcggcccccacatcggc
tacctgccgcaggacgtcgagctctttgccgggacgatcgccgagaacatcgcccgcttt
tccgagatcgacgccgagcaggtcgtcgccgccgcccgcaaggcgggggtccacgagatg
atcctgcagctgccggacggctacaacacccggatcggcgagggcggtcgggcgctgtcc
ggtggccagcgccagcgcatcggcctggcgcgcgcgctctacggcgatccgaagatcgtg
atcctcgacgagccgaactccagcctcgacagcaacggtgaggccgcgctcgcccaggcg
ctgcgcacggccaaggccgaagggcgcacggtgctcgtgatcagccatcgcgcctcgctt
ctcaacgaggtcgacaagctcgccgtcttcaccggcggcacgctcaccatgtacgggccg
acgcgcgacgtgatggcccgcctgaacgcgggcaccggctccggcgcggcggcccccgcc
gcggccgtggccaattcggctcagccgatggggcaggtgacgcacatgacgcgggcgagc
ggctga
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