Antarcticirhabdus aurantiaca: OXU80_00335
Help
Entry
OXU80_00335 CDS
T09604
Name
(GenBank) tandem-95 repeat protein
Organism
jav
Antarcticirhabdus aurantiaca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Big_9
Cadherin_5
Cadherin_4
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
WAJ28738
LinkDB
All DBs
Position
80847..84701
Genome browser
AA seq
1284 aa
AA seq
DB search
MATFDVRAFGAVGDGVTDDTAAIKRAIDACKAAGGGTIEMSAGTYIVRGDPANASRGPIE
LYSNMTLAGAGIGETVIKLADDFNARINGIVRTALETVDNVLISNLTIDGNRANNTGHQA
GFICGIKEDSGKTQSNITLDAVEAKNCTAYGINPHEITTNMVVKNSVSHGNGLDGFVADA
VFGGSYSNNLAYDNDRHGFNLQNMTKDLVLENNEARGNGSAGLTIQRGDIPLESGGEPPH
VRNILVKGGEYHDNAKEGMLIKLSDAVTVDGASIHDNLRQGVRIEGSINTTVKNSILTNN
AQEADNTYDEINIRLRLDDAITKTTIYSTGTKILDNTIGSTGAVNARYGIREEPTNDDGG
ATGTVATGNVITGMDSGPLSIPSFTETGTPGNDVFYGTTGANTFSGLGGDDTYTVNHTGD
VVIEAAGGGTDTVISSLNHTLAANVENLTLTGAAVRGTGNALANTIIGNAGNNELEGLGG
DDVLDGGAGADAMKGGDGNDTYYVDNVGDTVVEKQNAGLGGVDTVISSVSYTLSDEVENL
TLTGTASLDATGNSARNVLIGNTGTNVLNGLVGADTMEGKGGNDTYVVDNTGDVVIEAAG
AGIDTVVSSIAYVLGANVENLTLSGAAAINGDGNALANAITGNAAANRLHGWDGNDVLDG
GAGADQLYGDAGDDVFVFAKGQANGDTIEDFDGKGAAAGDRIVLVGYGAGTTVVQGAGST
WTIVDGAASETITIKRPVGAAAVDLSDFAFANGAPVPGEGGGGPVPGRPPVAAATGNAAG
VAEDTTLSGRLPAATDPDGNSGLTYLLVSPVQGLALGSGGTFTYAPPANFAGTTVFQYQA
VDPSGLKSAVTDFVITVSPVNDAPVAASLGNAASAPDGAVFAGRLPAAADPDAGDALTYV
QVGSLAGLVLKPDGSFTYAAAPNASGIVSFQYQAKDAAGALSAVTSFALTIENRNDAPVA
AASGNGASGNEDTVITGSLPAASDPDGDTGLTYHLVAAVQGLTLNPNGTFSYAPAPDFFG
TASFQYQVKDPGGLLSQAQTFTITVIDVPETTPGGATITGTGGANTLNGTAGNDTIDGLS
GADTMAGKAGDDTYYVDTSSDKVIELASQGIDTVFAKSSFTIAADSHVEILKGIGTSAVT
LKGNDFANAITGNDAANTISGGGGNDRLDGGLGKDVLTGGAGQDAFLFSTALGGSNVDTI
KDFVVRDDDIGLARAIFGNLGVEDLDPNAFVVGKAALDASDRIIYDKAAGALLFDADGAG
GAAAIQFAVISPNLAISADDFFLF
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttgatgtgagggccttcggcgcggtcggcgacggcgtgaccgacgacacg
gcggcgatcaagcgcgccatcgatgcctgcaaggcggcgggcggcggcaccatcgagatg
tcggcaggcacctatatcgttcgcggcgatcccgccaacgcctcgcgcgggccgatcgag
ctctattccaacatgaccctcgcgggcgcgggcatcggcgagacggtgatcaagctcgcc
gacgacttcaacgcgcgcatcaacggcatcgtgcgcaccgccctcgaaacggtcgacaac
gtcctgatctcgaacctgacgatcgacggcaaccgcgccaacaacaccggccatcaggcc
ggcttcatctgcggcatcaaggaggacagcggcaagacccagtccaacatcaccctggac
gccgtcgaggcgaagaactgcaccgcctacggcatcaacccgcacgagatcaccacgaac
atggtggtgaagaactccgtctcgcacggcaacggactcgacggcttcgtcgccgacgcg
gtgttcggcgggtcctattcgaacaacctcgcctacgacaacgaccgccacggcttcaac
ctccagaacatgaccaaggacctggtcctggagaacaacgaggcgcgcggcaacggctcg
gcaggcctcaccatccagcgcggcgacatcccgctggagagcggcggcgagccgccgcat
gtcaggaacatcctggtgaagggcggcgaataccacgacaacgccaaggagggcatgctg
atcaagctctccgacgccgtcaccgtcgacggcgcctcgatccacgacaacctgcgccag
ggcgtgcgcatcgaagggtcgatcaacacgacggtcaagaacagcatcctgacgaacaac
gcgcaggaggccgacaacacctatgacgagatcaacatcaggttgcgcctcgacgacgcc
atcaccaagaccacgatctactcgaccggcacgaagatcctcgacaatacgatcggctcg
accggcgcggtcaacgcccgctacggcatccgcgaggagccgaccaacgacgatggcggg
gcgacgggcacggtcgcgacgggcaacgtcatcacgggcatggattccggcccgctctcg
atcccgagcttcaccgagacgggcacgcccggcaacgacgtcttctacggcaccacgggc
gccaacaccttttcgggcctcggcggcgacgacacctacaccgtcaaccacaccggcgac
gtggtgatcgaggcggccggcggcggcaccgacacggtgatctcgagcctcaaccacacg
ctggcggccaatgtcgagaacctgacgctgaccggcgccgccgtccgcggcaccggcaac
gcgctcgccaacacgatcatcggcaacgccggcaacaacgagctcgagggtctgggcggc
gacgacgtcctcgacggcggagcgggcgccgacgcgatgaagggcggcgacggcaacgac
acctattacgtcgacaacgtcggcgacacggtggtcgagaagcagaatgccggcctcggc
ggcgtcgacacggtgatctccagcgtttcctacaccctgtccgacgaggtcgagaacctg
acgctcaccggcacggcgagcctcgacgccactggcaacagcgcccgcaacgtcctgatc
ggcaataccggcaccaacgtcctcaacggtttggtcggcgccgacaccatggagggcaag
ggcgggaacgacacctatgtcgtcgacaacaccggcgacgtggtgatcgaggccgcgggc
gcgggcatcgacacggtggtgtcgagcatcgcctacgtgctcggcgccaacgtcgagaac
ctgaccctgtcgggcgcggccgcgatcaacggcgacggaaacgcactcgccaacgcgatc
accggcaacgcggccgccaaccgcctccacggctgggacggcaacgacgtcctcgacggc
ggcgcgggggcggaccagctctacggcgacgctggcgacgacgtcttcgtcttcgccaag
gggcaggccaacggcgacacgatcgaggacttcgacggcaaaggcgcggcagccggcgac
cggatcgtcctcgtcggctacggtgcgggcacgacggtcgtgcagggcgccggcagcacc
tggacgatcgtcgacggggcggcgagcgagacgatcacgatcaagcggccggtgggcgct
gcggccgtggacctgtccgacttcgccttcgcaaacggcgcgccggtgccgggtgagggc
ggcggcggcccggtgcccggccgcccgccggtcgcagccgccacgggcaacgcggcgggc
gtggcggaggacacgacgctgagcggcaggctgccggcggccaccgatcccgacggcaat
tcgggcctcacctacctcctggtctctccggttcaggggctggcgctcggatccggcggc
accttcacctacgcgccgccggccaacttcgccggcacgacggtgttccagtatcaggcg
gtcgatccaagcggcttgaagagcgcggtcacggacttcgtcatcaccgtctcgcccgtc
aacgacgcaccggtcgcggcgagcctcggcaacgcggcgagcgcgccggacggagcggtg
ttcgcgggccgccttccagccgccgccgatcccgacgccggcgacgcgctgacctatgtc
caggttggcagcctcgccggtctggtcctcaagccggacggcagcttcacctacgccgcc
gcgcccaatgcctcggggatcgtcagcttccagtaccaggcgaaggacgcggccggcgcg
ctgagcgcggtgacgagcttcgctttgaccatcgagaacaggaacgacgcgcccgtcgcc
gcggcctccggcaacggcgcgagcggcaacgaggacacggtgatcacgggaagccttccc
gccgcgagcgatccggacggcgacaccgggctcacctaccacctcgtcgccgccgtccag
ggcctgaccctcaacccgaacggcaccttcagctacgcgcccgcgccggacttcttcggc
acggcgagcttccagtaccaggtcaaggatcccggcggcctcctgagccaggcccagacc
ttcaccatcaccgtcatcgacgtgccggaaacgacgcccggcggcgcgacgatcaccggc
acgggcggcgccaacacgctgaacggcacggccgggaacgacacgatcgacggcctttcc
ggcgccgacaccatggccggcaaggcgggcgacgacacctattacgtcgacacgtcgagc
gacaaggtgatcgagctcgcgtcccaaggcatcgacacggtcttcgcgaaatcgagcttc
accatcgccgccgacagccacgtcgagatcctcaaggggatcggaacctccgccgtgacg
ctgaagggcaacgacttcgccaacgcgattaccggcaacgacgcggccaacacgatctcg
gggggcgggggcaacgaccggctcgacggggggctgggcaaggatgtcctcaccggcggc
gcgggacaggacgccttcctgttctccacggcgctcgggggcagcaacgtcgacacgatc
aaggacttcgtcgtgcgcgacgacgacatcggcctggcgcgggcgatcttcggcaacctg
ggcgtcgaggacctggaccccaacgccttcgtcgtcggcaaggcggcgctcgatgcaagc
gaccgcatcatctacgacaaggccgccggcgcgcttctgttcgacgcggacggggcgggc
ggcgcggccgcgatccagttcgcggtgatctcgcccaacctcgcgatcagcgccgacgac
ttcttcctgttctga
DBGET
integrated database retrieval system
