Antarcticirhabdus aurantiaca: OXU80_01785
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Entry
OXU80_01785 CDS
T09604
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_01785 (addA)
Enzymes [BR:
jav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OXU80_01785 (addA)
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OXU80_01785 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WAJ29007
LinkDB
All DBs
Position
complement(400819..404532)
Genome browser
AA seq
1237 aa
AA seq
DB search
MSFTVSPRTNAAQAEASDPARSAFVSANAGSGKTHVLTQRVVRLLLAGAEPSRILCLTYT
KAAAAEMANRVFGRLALFATQPKKALDADLRSLLGRAPRDPDRTRARQLFACALETPGGL
KIQTIHAFCEAILHQFPIEAGVPGHFEVMDDSESALLLAEARRRLVTGGGLPFGRQPSQA
ERDARVAAFADALSLAGEKGLDGLLREIVSKRDAIRRHMEETGELPGALDALAESLGLPP
GADEAAALAAVWPCPGLDEAFLRDLGRTCLATAKSSDEKVAERIDACFAPPALAEPSTRF
AALSALLLTEKGEPRKRIVTKAVAEAFGDLDDRLAAAVAHVEAMRNRLASLRLYRASAAA
LILADALERDYALLKRRRGRLDFEDLIVATADLLTRSDASAWVHYKLDQGIDHVLIDEAQ
DTSPRQWEVMRSLIDEFFVGQTAREARRTIFAVGDEKQSIYSFQGALPRMFADERRSLLA
RAQGAERAFSVVELHQSFRSSGIVLQAVDRVFSLPENRRGLSADDRPPAHETVRQGAPGL
VELWPPFVSGSIEEPEDWLEPVDVQPENAPTSRLARRIAETVKGWLGDAIETRDGPRPLG
PGDVLVLVRKRSPFVDAMGKALRDAGIPVAGADRLLLTDHIAVCDLISLGRAVVNVDDEL
SLAEALKSPLFDFSEDELMALALVRDPFEPLSLSLRRLGTTEGVSRASYLELPGLNLETL
REKSALAGDRLDAMRDRAGFSGPFTFFARVLAREGGRGALVRRLGEDAGEVIDAFLDLAL
AHEDAHGPGLDAFLAELVAEPPQIKREMEHGRGEVRIMTVHASKGLEAPVVFLVDPGSAP
FHPSHGAKMMRWEDMPGLPPDAAPGFLWRASTSARNAALQGLAEVEKRGAEDEYRRLLYV
GMTRAADRLVLCGTAGAKGPHDECWLRIAERALEPVCEEVLDANGERLCLRFGSAEDGAA
AAARAPRGAEQLAFDLTPLAPEPRLPRTLAPSGAASAVAVEASPALEEAGPAAGRMQDGA
YLSPVLDGGAEPGFAIRRGIAAHRLLQVLPELAPEAREPAAMAFLESAAGLPDPAARAAL
WATVRRIMEEPRFAPAFAPGSRAEVPIAGTIEVGGRPVQVSGSIDRLAVSETRVLVVDYK
TNRPAPRSVEEVPEEYRLQLALYRAMLQPIYPGRRVEAALLFTEGPLWIEMPDEVLDAAL
RGGGRETAEAPAPPSAAQVGEARNAAGRRRFQPVDGA
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcaccgtcagcccccgcacgaacgccgcgcaggccgaggcctccgatcccgcg
cgctcggccttcgtgtccgccaatgccggctccggcaagacgcacgtgctcacccagcgc
gtcgtgcgcctgctgctcgccggcgccgagccctcgcgcatcctgtgcctcacctacacc
aaggcggcggcggcggagatggcgaaccgcgtcttcgggcggctcgcgctcttcgcgacg
cagccgaagaaggcgctcgacgcggacctcaggagccttctcggccgcgcgccccgcgat
cccgaccggacccgcgcgcgccagctgttcgcctgcgcgctggaaacgccggggggcctg
aaaatccagaccatccacgccttctgcgaggcgatcctccaccagttcccgatcgaggcg
ggcgttcccggccacttcgaggtcatggacgattcggagagcgcgctgcttctcgccgag
gcgcggcgccggctcgtcaccggcggcggcctgcccttcgggcgccagccgagccaggcc
gagcgcgacgcgcgcgtggccgccttcgccgacgccctgagcctcgcgggcgagaagggg
ctcgacggcctgctgcgcgagatcgtctccaagcgcgacgcgatccgccgccacatggag
gaaacgggcgagcttcccggcgcgctcgacgcgctcgccgagtcgctcggcctgccgccc
ggcgccgacgaggcggcggcgctcgcggccgtctggccctgccccggcctcgacgaggcg
ttcctgcgcgacctcggccgcacctgcctcgcgaccgcgaagtcctccgacgagaaggtg
gccgagcgcatcgacgcctgcttcgcgccgcctgccctggcggagccgtcgacgcgcttc
gccgcgctgtccgcgctgctgctcaccgagaagggcgagccgcgcaagcgcattgtcacc
aaggcggtggcggaagcgttcggcgacctcgacgaccgcctcgccgccgcggttgcacac
gtcgaggccatgcgcaaccgcctggcctcgctgcgcctttatcgcgcgagcgccgcggcg
ctcatcctcgccgacgcgctggagcgcgactacgcgctgctcaagcgccggcgcgggcgg
ctcgacttcgaggatctcatcgtcgccaccgccgacctcctcacccgctccgacgcctcg
gcctgggtccactacaagctcgaccagggcatcgaccacgtcctcatcgacgaggcgcag
gacacgagcccgcggcaatgggaggtgatgcgctcgctgatcgacgagttcttcgtcggc
cagaccgcccgcgaggccaggcgcaccatcttcgcggtcggcgacgagaagcagtcgatc
tattcctttcaaggggcgctcccgcgcatgttcgccgacgagcggcggtcgctgctcgcc
cgcgcgcaaggggccgagcgcgccttctctgtcgtcgagctgcaccagtccttccgctcg
tccggcatcgtcctccaggccgtcgaccgcgtcttctcgctgcccgagaaccggcgtggc
ctgtcggccgacgaccgcccgcccgcccacgagaccgtgcgtcagggcgcgcccggcctc
gtcgagctctggccgcccttcgtgtcgggcagcatcgaagagccggaggactggctggag
cccgtcgacgtccagccggagaacgcgccgacgagccgcctcgcccgccgcatcgccgaa
acggtgaaggggtggctcggcgacgccatcgagacgcgcgacggcccgcggccgctcggc
cccggcgacgtcctcgttctcgtgcgcaagcgctcgcccttcgtggacgcgatgggcaag
gcgctgcgcgacgccggcatccccgtggcgggcgccgaccggctgcttctcaccgaccac
atcgccgtctgcgacctcatctcgctcggccgcgccgtcgtgaacgtcgacgacgagctg
tcgctggcggaagcgctgaagagcccgctcttcgacttttccgaggacgagctgatggcg
ctcgccctcgtgcgcgatcccttcgagcccttgtccctgtcgctgcgccgcctgggcacg
acggaaggcgtctcgcgcgcctcgtacctcgagcttccgggcctcaacctcgaaaccctg
cgcgagaagtcggcgctggccggcgaccggctcgacgcgatgcgcgaccgcgccggcttc
tccggccccttcaccttcttcgcgcgggtgctggcccgggagggcgggcgcggtgccctg
gtgcgccggctcggcgaggacgcgggcgaggtcatcgacgcctttctcgacctcgcgctc
gcccacgaggacgcgcacggccccggcctcgacgcctttctcgccgagctcgtcgccgag
ccgccgcagatcaagcgcgagatggagcacggccgcggcgaggtgcggatcatgaccgtc
cacgcctccaagggcctggaagcgccggtggtcttcctggtcgaccccggctccgccccg
ttccacccgagccacggggcgaagatgatgcgctgggaggacatgcccggcctgccgccg
gacgcggcccccggcttcctgtggcgcgcctcgacgagcgcccgcaacgccgcgctgcag
ggcctcgccgaggtcgagaagcgcggcgccgaggacgagtaccgccgcctcctctatgtc
ggcatgacgcgcgccgccgaccgcctggtcctgtgcggcacggccggcgcgaaggggccg
cacgacgagtgctggctccggatcgccgagcgggcgctggagccggtctgcgaggaggtg
ctcgacgcgaacggcgagcgcctgtgcctgcgcttcggctcggccgaggacggcgcggcg
gcggcggcccgcgcgccccgcggcgccgagcagctcgccttcgacctgacgccgctggcc
cccgagccgcgcctgccgcgcactctcgccccgtcgggcgcggcaagcgccgtcgcggtg
gaggcctcgccggcgctggaggaggccgggccggcggcggggcgcatgcaggacggcgcc
tacctctcgcccgtcctcgacggcggcgccgagcccggcttcgccatccgccgcggcatc
gccgcccaccgcctcctccaggtcctccccgaactcgctcccgaggcgcgcgagccggcc
gccatggcctttctggaatcggccgcgggcctgccggatcccgccgcgcgcgccgccctc
tgggcgacggtgcggcggatcatggaggagccgcgcttcgcgccggccttcgcgccgggc
agccgcgcggaggtgccgatcgccggcacgatcgaggtcggcgggcggcccgtccaggtt
tccggctcgatcgaccgtctggcggtgagcgagacgcgcgtcctcgtcgtcgactacaag
accaaccgtccggcgccccgcagcgtcgaggaggtgccggaggaataccggctgcagctc
gcgctttatcgcgcgatgctccagccgatctatccgggacgccgcgtcgaggccgcgctg
ctcttcaccgaggggccgctctggatcgaaatgccggacgaggttctcgacgccgctctc
cggggcggcggacgcgaaacggcggaggcgccggcgcccccctccgccgcgcaagtaggg
gaggcgcgaaacgcggcggggcgccgtcgtttccagcctgttgacggcgcgtga
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