Antarcticirhabdus aurantiaca: OXU80_01790
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Entry
OXU80_01790 CDS
T09604
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_01790 (addB)
Enzymes [BR:
jav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OXU80_01790 (addB)
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OXU80_01790 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
WAJ29008
LinkDB
All DBs
Position
complement(404765..407890)
Genome browser
AA seq
1041 aa
AA seq
DB search
MQLRVLSIPPGLPFLKTLAREFLDGRIVPGFRHDPADPLKLAGATILLPSRRAARLLAAE
FAAALGGGPAILPTLRVVGEADETAAFLLPGGAEAALSPVVSGMERRLILARLVRRWRRL
TTREEVEALIEHDIPPPASAADALWLARDLCELLDEAENENVSLDGLAELAPERLSDWWR
MTLDFLAILTRHWPDILAARGLVSEASARNAAERALAERLALEGSPGGPMVIAGSTATAP
ASVELMRAVARLPNGALVLPGLDRDLDKAGWDAIDVSRAIASPGHPQYPMKRILGRLLLP
PEAVDHVGGADDPADPRRARERLLSFALRPAETTAVWAEEAGAIPPAAIDGLALVEAPDE
RTEALAAAIAMRHALDVPGATAALVTPDRNLARRVVAELQRFGIEANDSAGRPLASTAPG
TLLSLVLDAALRPGDPLTLVSLLKHPLMRAGMMPGEARRAARAIETIALRGRVGVPDVAK
LPELLASALEDLLEATNVPRPVRLVGPNDRELAKTLAANLAAALEPLTALRNAEPSELGD
VAPLVTRAVEAAAADPEGSAAKLYAFETGEALAAFLSDLVQAPATGFGVEPGDLPDVVRA
LLADRTVRPRGGLSTRAFILGTIEARLAHVDLAVLAGLNENTWPGGAKSGAFLSRLMRSE
MALEPPERRIGLAAHDFWMAMGAPQVVLSRSTRSGGAPTIASRWLQRLLAVAGKEGAAAM
RREGEPYLAHAVGIDRPAPGAPAPAPSPRPAPRPPLGFRPTSYSVTEVETLIRDPYAVYA
RRVLRLEPMPDLIRSPGAADRGILFHRVLGDFVADGNDPAGPEAETILLAYAREAFQEER
LPAEIEAVWWPRMEAMARNVVAWERERAPRVARRLAELKGALDVPDIEVKLTGRADRVDV
MTDGSLEIIDFKTGSGPSVKQARTLLAPQLPLEAAMARHGGFAAGGAPAAPVGELLFVRL
KERAVEPEPLSKAATATSEAITADDLACRAYDKFRALAALYAKRDTPYPSRARPYLASDF
SGTYDHLARAREWSAGVEGEE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccgtgtcctctcgatcccacccggcctgccgtttctgaagacgctcgcgcgc
gagtttctcgacgggcggatcgtgccgggcttccggcacgatcccgccgatccgctgaag
ctcgccggcgcgaccattctcctgccctcgcgccgcgccgcgcgcctcctggcggccgag
ttcgcggcggccctcggcggcgggccggcgatcctgccgaccctgcgcgtggtcggcgaa
gcggatgagaccgccgccttcctgctgcccggcggggccgaggccgcgctctcgcccgtg
gtcagcggcatggagcgccggctgatcctcgcccgcctcgtgcgccgctggcgccgcctg
acgacgcgcgaggaggtggaagccctgatcgagcacgacatccccccgccggcctccgcg
gccgacgcgctctggctcgcccgggacctctgcgaactcctcgacgaggcggaaaacgag
aacgtctcgctcgatggcctcgccgagctcgcccccgagcgcctcagcgactggtggcga
atgacgctggacttcctcgcgatcctcacccgccactggccggacatcctcgccgcccgc
ggcctcgtgtcggaggcgagcgcgcgcaacgccgccgagcgcgcgcttgccgagcggctg
gcgctggaaggctcgcccggcgggccgatggtgatcgccggctccaccgccacggctccc
gcgagcgtcgagctgatgcgcgcggtcgcccgcctgccgaacggcgccctcgtcctgccc
ggcctcgaccgcgacctcgacaaggccggctgggacgcgatcgacgtgtcccgcgccatc
gcctcgcccggtcatccgcaatatccgatgaagcgcatcctcggccgcctcctgctgccg
cccgaggcggtcgaccacgtcggcggcgcggacgatcccgccgatccccgccgcgcccgc
gagcgcctcctgtccttcgcgctccgccccgccgagaccaccgccgtctgggccgaggaa
gccggcgcgatcccgcccgccgccatcgacggcctcgcgctcgtcgaggcgccggacgag
cgcacggaagccctcgccgcagccatcgccatgcgccatgcgctggacgtgccgggcgcg
accgcggccctcgtcacgcccgaccgcaatctcgcccgccgcgtcgtcgccgagctgcag
cgcttcggcatcgaggcgaacgattcggccggccggccgctcgcctccaccgcgcccggc
acgctgctctcgctcgtcctcgacgcggcgctgcgccccggcgatccgctcaccctcgtc
tcgctcctcaagcatcccctgatgcgcgccggcatgatgccgggcgaggcgcgccgcgcc
gcccgcgccatcgagacgatcgccctgcgcgggcgcgtcggcgtgcccgacgtcgccaag
ctccccgaactcctggcgtccgccctggaagatctcctcgaagccaccaacgtgccgcgc
ccggtgcgcctcgtcggcccgaacgaccgcgagctcgccaagaccctcgcggccaacctc
gcggcggccctggagcccttgaccgcgctgcgcaatgccgagccgtccgagctcggcgac
gtcgccccgctcgtcacccgcgccgtcgaggccgcggcggccgatcccgagggcagcgcc
gccaagctctacgccttcgagaccggcgaggcgctggccgccttcctgtcggacctcgtc
caggcgccggcgacgggcttcggcgtcgagccgggcgacctgccggacgtcgtgcgcgcc
cttctcgccgaccgcacggttcggccgcgcggcggcctgtcgacccgcgccttcatcctc
ggcacgatcgaggcgcgcctcgcccatgtcgacctcgcggtgctcgccggcctcaacgag
aacacctggccgggcggcgccaagtccggcgccttcctgtcgcggctgatgcgctcggaa
atggcgctggagcctccggagcggcggatcggccttgccgcccacgacttctggatggcg
atgggcgcgccgcaggtcgtcctgtcgcgctcgacgcgctcgggcggcgcgccgaccatc
gcctcgcgctggctgcagcgcctcctcgcagtggcgggcaaggagggcgcggccgccatg
cgccgcgagggcgagccctatctggcgcacgccgtcggcatcgaccggccggcacccggc
gccccggcgcccgcacccagcccgcggcccgccccgcgtccgccgctcggcttccgtccg
acgagctattcggtgaccgaggtcgagacgctgatccgcgatccctacgccgtctatgcc
cggcgcgtcctgcgcctggagccgatgccggacctcatccgcagcccgggcgccgccgat
cgcggcatcctcttccaccgcgtcctcggcgacttcgtcgcggacggcaacgatccggcg
ggccccgaggccgagacgatccttctcgcctatgcccgcgaggccttccaggaggagcgc
cttccggccgagatcgaggccgtctggtggccgcgcatggaggcgatggcgcgcaacgtc
gtcgcctgggagcgcgagcgcgccccccgcgtggccaggcgcctcgccgagctgaagggc
gcgctggacgttcccgacatcgaggtgaagctgacgggccgcgccgaccgggtcgacgtg
atgaccgacgggagcctcgagatcatcgacttcaagaccggcagcgggccgtcggtgaaa
caggcccgcacgcttctcgcgccccagctcccgctggaggcggcgatggcgcggcatggc
ggctttgccgcaggcggcgcgccggcagcccccgtcggcgagctcctcttcgtgcgcctc
aaggagcgcgcggtcgagcccgagcccctgtcgaaggcggcgacggccacgagcgaggcc
atcaccgccgacgacctcgcttgccgcgcctacgacaagttccgggccctcgccgccctc
tacgccaagcgcgacacgccctatccgtcgcgcgcccgtccctatctcgccagcgacttt
tccggcacctacgaccacctcgcgcgggcgcgcgaatggtcggcgggggtggagggggag
gaatga
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