Antarcticirhabdus aurantiaca: OXU80_01970
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Entry
OXU80_01970 CDS
T09604
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jav03016
]
OXU80_01970 (truB)
Enzymes [BR:
jav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OXU80_01970 (truB)
Transfer RNA biogenesis [BR:
jav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OXU80_01970 (truB)
Prokaryotic type
OXU80_01970 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WAJ29040
LinkDB
All DBs
Position
complement(443708..444694)
Genome browser
AA seq
328 aa
AA seq
DB search
MARQGRKPKGRPVNGWVIFDKPRGMGSTEAVSRIKWLFFAQKAGHAGTLDPLASGMLPIA
LGDATKTVPFVMDGEKTYRFTVRWGAETTTDDLEGPQVRTSEARPSRAEIEALIPRYVGE
ISQVPPTFSAIKIEGNRAYDLARDGEPVEIPARTVTVHSLVVVDMPDDATTVFEAECGKG
TYVRAIARDMGRDLGCFGHIVDLRRTAVGAFDEDDLVTVAEIDAAADAGLEALDAEAVEA
GAKARVTDFRPLDSLMLPVETALSDLYEVQLTPDQASRVLAGNPVLLRGRDAPAFMDDAY
AVGHGRLVALGSVEEGAFKPKRVFGGKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccagggacgcaagcccaagggccggccggtcaacggctgggtgatcttcgac
aagccgcgcggcatgggctcgaccgaggcggtgtcgcgcatcaagtggctgttcttcgcc
cagaaggcggggcacgccggcacgctcgaccccctggcctccggcatgctgccgatcgcg
ctcggcgacgccacgaagaccgtgcccttcgtcatggacggcgagaagacctatcgcttc
accgtccgctggggcgcggaaaccaccaccgacgacctcgaagggccgcaggtccgcacc
tccgaggcgcgcccgagccgcgccgagatcgaagcgctgatcccgcgctacgtcggggag
atttcccaggtgcccccgaccttctcggcgatcaagatcgagggcaaccgcgcctacgac
ctcgcccgcgacggcgagccggtggagatccccgcgcgcaccgtcaccgtccacagcctc
gtcgtcgtcgacatgccggatgatgccaccacggtcttcgaggccgagtgcggcaagggc
acctatgtgcgcgccatcgcccgcgacatgggccgcgacctcggctgcttcggccacatc
gtcgacctgcgccgcacggccgtcggcgccttcgacgaggacgacctcgtcaccgtcgcc
gagatcgacgcggcggccgatgccggccttgaagcgctcgacgccgaagcggtggaggcg
ggcgccaaggcgcgcgtcaccgacttccggccgctggattcgctcatgctgccggtcgag
acggcgctgtccgacctttacgaggtgcagctgacgcccgaccaggcctcgcgggtcctc
gccggcaatccggtgctcctgcgcgggcgcgacgcgcccgccttcatggacgatgcctat
gccgtcgggcacggccgcctcgtcgcgctcggcagcgtcgaggaaggcgccttcaagcct
aagcgcgtcttcggcggcaagggatga
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integrated database retrieval system
