Antarcticirhabdus aurantiaca: OXU80_03195
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Entry
OXU80_03195 CDS
T09604
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jav03016
]
OXU80_03195
Enzymes [BR:
jav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OXU80_03195
Transfer RNA biogenesis [BR:
jav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OXU80_03195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WAJ29258
LinkDB
All DBs
Position
complement(710697..711314)
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AA seq
205 aa
AA seq
DB search
MTIRVHKNDLPDIARYTGPVAIDTETLGLDTRRDRLCVVQLSPGDGTADIVQISKGQREA
PNIAKLLKDASKTKIFHYARFDVATLFHTFGVMTDGIFCTKIASRLTRTYTDRHGLKDLA
RELIGVDLSKQQQSSDWAAETLSPAQIEYAASDVLYLHDIMGVLYKRLDREDRMDLAKSC
FSFLPTRVRLDLLGWENEDIFSHSI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgcgtccacaagaacgaccttcccgacatcgcccgctacaccggcccggtc
gccatcgacaccgagacgctcggcctcgacacgcgccgcgaccggctctgcgtcgtacag
ctctcgccgggcgacggcacggccgacatcgtccagatctccaaggggcagcgcgaggcg
cccaacatcgccaagctgctcaaggacgcctcgaagacgaagatcttccactacgcccgc
ttcgacgtcgccacgctcttccacaccttcggggtcatgacggacggcatcttctgcacc
aagatcgcctcccgcctgacgcgcacctatacggaccggcacggcctcaaggacctcgcc
cgcgagctgatcggcgtggatctgtccaagcagcagcagtcctcggactgggcggccgag
acgctctcgccggcgcagatcgagtacgcggcctcggacgtcctctacctccacgacatc
atgggcgtcctctacaagcggctcgaccgcgaggaccggatggacctcgccaagagctgc
ttctcgttcctgccgacgcgggtccgcctcgatctcctcggctgggagaacgaggacatc
ttctcgcattcgatctga
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