KEGG   Antarcticirhabdus aurantiaca: OXU80_06590
Entry
OXU80_06590       CDS       T09604                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
jav  Antarcticirhabdus aurantiaca
Pathway
jav02020  Two-component system
Brite
KEGG Orthology (KO) [BR:jav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OXU80_06590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:jav02022]
    OXU80_06590
Two-component system [BR:jav02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   OXU80_06590
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 T2SSE AAA_16 HTH_50 Fer2_4 HTH_30 AAA
Other DBs
NCBI-ProteinID: WAJ31379
LinkDB
Position
1410308..1411660
AA seq 450 aa
MQNEPVEVLFVDDEEHLRIANAQSLQLSGFRATPLGSAVEALEILSPDFPGVLVTDLRMP
GMDGMALFRRVLAMDPDLPVILVTGHGDVETAVAALKEGAYDFIAKPFSGDRLAESVRRA
GEKRRLVLENRRLTEAASRVDESLPLIGETPAIQRLRATLRQIASAQVDVLVEGETGSGK
EVVASLLHAWSERRARPFVALNCGALPETVMESELFGHEAGAFTGAQKRRIGRIEHSSGG
TLFLDEIESMPPALQVKLLRVLETRSVDPLGTNQARSVDLRVVAAAKVDLGDPAQRGTFR
EDLYHRLNVVTLRIPPLRERRDDVPLLFAHFLARAATRFGRPVPTISAQGLRYLRTHDWP
GNVRELTHHAERVVLGLADIDGEGDTAAPAAPASPGASLPERVEAYEGELIRQALTDNGG
DVRSTIEALGIPRKTFYDKLKRHGIERRGG
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcagaacgagccggtcgaggtgctcttcgtcgacgacgaggagcatctgcgcatcgcc
aacgcgcagagcctgcagctctccggctttcgcgcgacgccgctcgggagcgccgtggaa
gcgctggagatcctctcccccgactttcccggcgtcctcgtcacggacctgcgcatgccc
ggcatggacggcatggcgctgttccggcgggtgctggcgatggatccggacctgccggtg
atcctcgtcaccggccacggcgacgtcgagacggcggtggcggccctgaaggagggcgcc
tacgacttcatcgccaagccgttctcgggcgatcgcctcgccgaaagcgtgcgccgcgcc
ggagagaagcggcggctcgtcctggagaaccgacggctgacggaggccgcgagccgcgtc
gacgaatcgctgccgctgatcggcgagacgccggcgatccagcgcctgcgcgcgacgctg
cgccagatcgcctccgcccaggtcgacgtcctcgtggagggcgagacgggatcgggcaag
gaggtggtggcgagcctgctgcatgcctggagcgagcggcgcgcccggcccttcgtcgcg
ctgaactgcggcgcgctgcccgaaacggtgatggagagcgagcttttcggccacgaggcc
ggcgccttcaccggggcgcagaagcggcgcatcgggcgcatcgagcattcgagcggaggg
acgctgtttctcgacgagatcgaatcgatgccgcccgcgctgcaggtgaagctcctgcgc
gtcctggaaacgcgcagcgtcgacccgctcggcaccaaccaggcgcggtccgtggacctg
cgcgtcgtcgcggcggcgaaggtggacctcggcgacccggcgcaacgcggcaccttccgc
gaggacctctaccaccgcctcaacgtcgtgacgctgcgcattccccccttgcgcgagcgg
cgcgacgacgtgcccctcctgttcgcacacttcctcgcccgcgccgcgacccgcttcggc
cggccggtgccgacgatctcggcgcaaggcctgcgctacctgcgcacccacgactggccc
ggcaacgtgcgcgagctgacccaccacgccgagcgcgtggtgctgggtctggccgacatc
gacggcgagggagacacggccgcgcccgcggcacccgcctcgccgggcgcgagcctgccc
gagcgcgtcgaggcctatgagggggagctgatccgccaggcgctcaccgacaacggcggc
gacgtgcgctcgacgatcgaggccctcggcatcccccgcaagaccttctacgacaagctc
aagcgccacggcatcgagcggcggggcgggtga

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