Antarcticirhabdus aurantiaca: OXU80_08080
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Entry
OXU80_08080 CDS
T09604
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav03030
DNA replication
jav03430
Mismatch repair
jav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OXU80_08080
03430 Mismatch repair
OXU80_08080
03440 Homologous recombination
OXU80_08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jav03032
]
OXU80_08080
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_08080
Enzymes [BR:
jav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OXU80_08080
DNA replication proteins [BR:
jav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OXU80_08080
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OXU80_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_19
AAA_14
AAA_18
TsaE
AAA_24
Adeno_E1B_55K_N
DUF815
AAA_assoc_2
SRP54
AAA_33
RCF1-5-like_lid
ABC_tran
VapE-like_dom
CbiA
Rad17
RNA_helicase
nSTAND3
AAA_28
SKI
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WAJ30154
LinkDB
All DBs
Position
complement(1701264..1703318)
Genome browser
AA seq
684 aa
AA seq
DB search
MSDSGAADTGSYRVLARKYRPRSFDDLIGQEPMVRTLTNAFETGRIAQAWMLTGVRGVGK
TTTARILARALNYETDAIKQPTIHMTTPGIHDQAIMEGRHVDVVEMDAASHTGIDDIREI
IAQVRYKPLSARYKVTIIDEVHMLSTQAFNGLLKTLEEPPEHAKFVFATTEIRKVPVTVL
SRCQRFDLRRVEAGTLIAHLKSIAEKESVPAEDEALRLIARAAEGSVRDALSLTDQAIAH
GAGRIEAQPVRDMLGLADRARVIDLFEEVMAGRAPRALTMLRDQYNGGADPIVVLADLAD
FTHLVTTLRFVPEAATDASLSPAEAERGLAFARTLSIRALSQVWQMLLKAIEEARGAASP
RQAAEMALIRIAYAADLPGPEELLRRYRAGETDAFADLPAGGGSSPSPRLPGDAPPRPPL
NAAAGAGAPLPAMAAPPSPGPRAALQASVAAAPQTQGMAPQPRLGETRPRLAAIGGGAQP
QGAPRPAPQPEPEAEAEDIASLADLARLAETKRDSFMRVAIRRWLRPVSIGPGRLSIALA
DGAPATLPGDLQRRLRDWTGRHWMVSVSAGDAPTLFEIEEAEKAARLAKAAEDPEVAAIL
AAFPGAVIRDVRERAPAPPPETVADIADIVAEAEAETDTDAEGDGDGDGEANVSLHGRGD
VLAPVEESDDEFGSGWEPDPYGER
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccggcgccgccgatactggctcctaccgcgtcctcgcccgcaagtaccgt
ccgcgctccttcgacgatctcatcggccaggagccgatggtgcgcaccctcaccaatgcc
ttcgagaccggccgcatcgcgcaagcctggatgctgacgggcgtgcgtggggtgggcaag
accaccacggcccgcatcctcgcccgcgctctcaactacgagacggacgcgatcaagcag
ccgaccatccacatgacgacgcctggcatccacgatcaggcgatcatggaaggccggcac
gtcgacgtcgtcgagatggacgcggcctcgcacaccggtatcgacgacatccgcgagatc
atcgcgcaagtccgctacaagccgctctcggcgcgctacaaggtgacgatcatcgacgag
gtccacatgctgtcgacgcaggccttcaacggcctgctgaagacgctggaggagccgccc
gagcacgccaagttcgtcttcgccacgaccgagatccgcaaggtcccggtcacggtcctg
tcgcgttgccagcgtttcgacctgcgccgcgtcgaggccggcaccctcatcgcccatctc
aagagcatcgccgagaaggaaagcgtgccggccgaggacgaagcgctgcgcctcatcgcg
cgcgccgccgagggctcggtgcgcgacgccctgtcgctgaccgatcaggccatcgcccac
ggagcggggcgcatcgaggcgcagcccgtgcgcgatatgctcggccttgccgaccgcgcc
cgcgtcatcgacctcttcgaggaggtcatggccggccgcgcgccgcgcgcgctgaccatg
ctgcgcgaccagtacaacggcggcgccgaccccatcgtggtgctggcggacctcgccgac
ttcacccatctcgtgacgacgctccgcttcgttccggaggccgccaccgacgcctcgctc
tcgccggccgaggccgagcgcggcctcgccttcgcgcgaacgctctcgatccgggcgctc
agccaggtctggcagatgctcctcaaggcgatcgaggaagcgcgcggcgccgcctcgccg
cgccaggccgccgagatggcgctgatccgcatcgcctacgcggccgacctgcccggcccc
gaggagctgctgcgccgctaccgcgccggcgaaaccgacgccttcgccgaccttcccgct
ggcggcggctcgtccccgagcccacgcctgcccggcgatgcgccgccgcgcccgccgctg
aacgccgcagccggcgcgggggcgccgctgcccgccatggccgctccgccgagcccggga
ccgcgcgccgccttgcaggcgagcgtcgccgcggcgccgcagacgcagggcatggccccc
cagccgcgcctcggcgagacccgcccgcgcctcgccgcgatcggcggcggcgcccagccg
cagggcgcgccccgtcccgcgccgcagccggagcccgaggcggaggctgaggacatcgcc
tcgctggccgacctcgcccgcctcgccgagaccaagcgcgacagcttcatgcgcgtcgcg
atccgccgctggctgcgccccgtctccatcgggcccggccgcctgtcgatcgcgctggcc
gacggcgcgcccgcgaccctgccgggcgacctccagcggcgcctgcgggactggaccggc
cgccactggatggtgtcggtctcggccggcgacgcgccgacgctcttcgagatcgaggaa
gcggaaaaagccgcgcgcctcgccaaggccgccgaggaccccgaggtcgccgcgatcctc
gccgcctttcccggcgcggtgatccgcgacgttcgcgagcgcgcccccgcgcctccgccg
gagaccgtggccgacatcgcggacatcgtggcggaggccgaagccgagaccgacacggac
gccgagggcgacggcgacggcgacggcgaggcgaatgtttcgcttcacggccgcggcgac
gtcctggcgccggtcgaggagtccgacgacgagttcggctccggctgggaacccgatccc
tatggcgagcgctga
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