Antarcticirhabdus aurantiaca: OXU80_08950
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Entry
OXU80_08950 CDS
T09604
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav00630
Glyoxylate and dicarboxylate metabolism
jav00680
Methane metabolism
jav01100
Metabolic pathways
jav01120
Microbial metabolism in diverse environments
jav01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OXU80_08950 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
OXU80_08950 (fdhF)
Enzymes [BR:
jav01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
OXU80_08950 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_6
Fer4_2
Fer4_16
Fer4_18
Fer4_9
Fer4_8
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
WAJ30311
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All DBs
Position
1874149..1876995
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AA seq
948 aa
AA seq
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MSLVHEIDYGTPKSRAEKTVTLTVDGFAVTVPEGTSVMRAATEAGIGVPKLCATDMMDAY
GSCRLCVVEVEGMRGTPASCTTPVVEGMKVRTQTERLKAIRKGVMELYISDHPLDCLTCA
ANGDCELQTQAGAVGLREVRYGYEGENHLGKAKDQSNPYFQFDPSKCIVCSRCVRACGEV
QGTFALTVDGRGFDSLISAGTSYDDFLSSECVSCGACVQACPTATLQEKSVVQIGTPDRS
VVTTCAYCGVGCSFKAEMRGDELVRMVPYKDGKANRGHSCVKGRFAFGYATHKDRILNPM
IRDHYSQPWREVSWEEAFAFSAAKIKDIQDRHGRGSVGAISSSRCTNEEVYLVQKLVRAG
FGNNNIDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEYTDVALVIGANPTDGHPVFASR
LKKRLREGAKLIVIDPRRIDLVRTPHVEAEHHLALKPGTNVAMVTALAHVIVTEGLVNES
FVRERCDWDDFQEWAAFVAEERHSPEAVERVTGVPAEEVRKAARLYATGGNGAIYYGLGV
TEHSQGSTTVMAIANLAMVTGNIGRVGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHIST
DEVRSIYEDLWGVVIDKEPGLRIPNMFDAAVEGTFKGLYVQGEDILQSDPDTKHVSAGLA
ALELLIVHDLFLNETANYANVFLPGSSFLEKDGTFTNAERRINRVRKVMAPRNGLADWEV
TQRLAQAMGLDMNYGHPSEIMAEIAATTPSFANVTYDLLERMGSVQWPCNETFPEGAPIM
HVDEFMRGKGKFVITEYVPTDERTGPRFPLLLTTGRILSQYNVGAQTRRTQNVLWHDEDV
LEIHPHDAEQRGIRESDWVRLDSRSGSTSLRARITTRVAPGVVYTTFHHPATQANVITTD
FSDWATNCPEYKVTAVQISPSNGPTDWQEDYRELTEESRRIAVAEAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtccacgagatcgactacggcacgccgaagtcccgcgccgagaagacggtg
acgctcaccgtcgacggcttcgccgtcacggtccccgagggcacctccgtcatgcgcgcg
gcgacggaggccggcatcggcgtgccgaagctctgcgcgaccgacatgatggacgcctac
ggctcctgccggctctgcgtcgtggaagtcgagggcatgcgcgggacgcccgcttcctgc
accacgccggtcgtggagggcatgaaggtccgcacccagacggagcgcctgaaggcgatc
cgcaagggcgtcatggagctctacatctccgaccatccgctggactgcctgacctgcgcg
gccaacggcgactgcgagcttcagacgcaggccggtgccgtcggccttcgcgaggtgcgc
tacggctacgagggtgagaaccacctcggcaaggccaaggaccagtcgaacccctacttc
cagttcgacccgtcgaagtgcatcgtctgctcgcgctgcgtgcgcgcctgcggcgaggtg
cagggcaccttcgcgctgacggtggacgggcgcggcttcgactcgctgatctcggccggc
acgagctacgacgacttcctctcctccgaatgcgtgtcctgcggcgcctgcgtccaggcc
tgcccgacggcgacgctgcaggagaagtcggtcgtccagatcggcacgccggaccgttcc
gtcgtcaccacctgcgcctattgcggcgtcggctgctcgttcaaggcggagatgcgcggc
gacgagctggtgcgcatggtgccctacaaggacggcaaggcgaaccgcggccattcctgc
gtgaagggccgcttcgccttcggttacgcgacccacaaggaccgcatcctcaacccgatg
atccgcgaccactattcccagccctggcgggaagtgtcgtgggaagaggccttcgccttc
tcggcagccaagatcaaggacatccaggaccgtcacggccgcggctcggtcggcgcgatc
tcctcctcgcgctgcaccaacgaggaggtctatctcgtccagaagctggtgcgcgccggc
ttcggcaacaacaacatcgacacctgcgcccgcgtctgccactcgccgacgggttacggc
ctcaagaccaccttcggcacctcggccggcacgcaggacttcgattccgtcgaatacacc
gacgtcgccctggtgatcggcgccaacccgaccgacggccaccccgtcttcgcctcgcgg
ctgaagaagcgcctgcgcgagggcgccaagctcatcgtcatcgacccgcgccgcatcgac
ctcgtgcgcacgccccatgtcgaggccgagcaccacctggcgctgaagcccggcaccaac
gtcgcgatggtgaccgcgctcgcccacgtcatcgtcaccgaaggcctcgtcaacgagagc
ttcgtgcgcgagcgctgcgactgggacgatttccaggaatgggccgccttcgtcgccgag
gagcgccattcgccggaagcggtggagcgcgtcaccggcgtgcccgccgaggaggtccgc
aaggccgcgcgcctctacgccaccggcggcaacggcgcgatctattacggcctcggcgtc
accgagcactcccagggctcgaccaccgtcatggccatcgccaacctcgccatggtgacc
ggcaatatcggccgcgtcggcgtcggcgtgaatcccttgcgcgggcagaacaacgtgcag
ggctcctgcgacatgggctcgttcccgcacgagctgccgggctatcgccacatctccacc
gacgaggtccgctcgatctacgaggacctctggggcgtcgtgatcgacaaggagcccggg
cttcgcatccccaacatgttcgacgcggcggtggagggcaccttcaaggggctctacgtc
cagggcgaggacatcctccagtcggacccggacaccaagcacgtctcggcgggccttgcc
gccctcgaactcctcatcgtccacgacctgttcctgaacgagaccgcgaactacgccaac
gtcttcctgcccggatcctccttcctggaaaaggacggcaccttcaccaacgccgagcga
cgcatcaaccgcgtgcgcaaagtgatggcgccgaggaacggcctcgccgactgggaggtg
acgcagcgcctcgcccaggccatgggcctggacatgaactacggccatccgtccgagatc
atggccgagatcgccgcgacgacgccctccttcgccaacgtcacctacgacctcctggag
cgcatgggctcggtgcagtggccctgcaacgagaccttcccggaaggcgcgccgatcatg
cacgtcgacgagttcatgcgcggcaagggcaagttcgtcatcacggaatacgtgccgacc
gacgagcgcaccggaccgcgcttcccgctgctcctgaccaccggtcgcatcctgtcgcag
tacaatgtcggcgcgcagacccggcgcacgcagaacgtcctgtggcatgacgaggacgtc
ctcgagatccacccgcacgacgccgagcagcgcggcatccgcgagtcggactgggtgcgc
ctcgacagccgctcgggctcgacctcgctgcgggcgcggatcacgacgcgcgtcgcgccg
ggcgtcgtctacacgaccttccaccatcccgcgacgcaggccaacgtcatcaccaccgac
ttctccgactgggcgaccaactgcccggaatacaaggtgacggcggtccaaatctcgccc
tccaacggcccgaccgactggcaggaggattatcgcgagctgacggaggaaagccgaagg
atcgccgttgccgaggcggcggagtga
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