Antarcticirhabdus aurantiaca: OXU80_09290
Help
Entry
OXU80_09290 CDS
T09604
Name
(GenBank) exonuclease domain-containing protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OXU80_09290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_09290
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OXU80_09290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WAJ30374
LinkDB
All DBs
Position
1947591..1948406
Genome browser
AA seq
271 aa
AA seq
DB search
MDDVFPAARIDAAPDLFAPPVSGLVRVIDTETAGRPLAEDAVIEIGSVDLDLATGTIGNP
MQTLVDPAGVGIDPRARRVHHISDEMLVGAPPFAEAVKPFLGAPAYAAQRASFDRSRLRF
SGRWLCTWKLALRAFPDVRAHGLQSLVKYVPLDLSPVADLLETLHPHRALYDAACTAVLL
RTIAERLEPRCDGLADFLGRAEQVSAEPALLAKLRFGRHKGVPLAQVPTDYLEWLVAEPG
MDADARFTAERQLTRRAVRGQRSLPENAVLG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgtttttcccgccgcgaggatcgacgcggcgcccgacctgttcgcgccgccc
gtatccggcctcgtgcgcgtcatcgacacggaaaccgccgggcgcccgctggcggaagac
gcggtgatcgagatcggctcggttgacctcgaccttgcgacgggcacgatcggcaatccg
atgcagaccctcgtcgatccggccggcgtcgggatcgatccccgtgcccgccgcgtccac
cacatcagcgacgagatgctcgtcggcgcgccgcccttcgccgaggcggtgaagccgttt
ctcggcgcgcccgcctatgcggcgcagcgggcgagcttcgatcgctcgcgcctgcgcttc
tccggccggtggctctgcacctggaagctggcgctgcgcgcctttcccgacgtgcgggcg
cacggactgcagagcctcgtgaagtacgtcccgctcgacctgtcgcccgtggcggacctc
ctcgaaacgctgcacccgcaccgcgcgctctacgatgcggcctgcacggcggttcttctc
aggacgatcgccgagcggctggagccgcgctgcgacgggctcgccgacttcctggggcgg
gccgagcaggtgtcggccgagccggcgcttctcgccaagctgcgcttcggccggcacaag
ggcgtgccgctggcccaggtgccgacggactacctcgaatggctcgtcgccgagcccggc
atggatgccgacgcgcgcttcacggccgagcgccagctgacgcgccgcgccgtgcgcggc
cagcggtcgctgccggagaacgccgttctcggctga
DBGET
integrated database retrieval system
