KEGG   Antarcticirhabdus aurantiaca: OXU80_12140
Entry
OXU80_12140       CDS       T09604                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
jav  Antarcticirhabdus aurantiaca
Pathway
jav00010  Glycolysis / Gluconeogenesis
jav00020  Citrate cycle (TCA cycle)
jav00260  Glycine, serine and threonine metabolism
jav00280  Valine, leucine and isoleucine degradation
jav00310  Lysine degradation
jav00380  Tryptophan metabolism
jav00620  Pyruvate metabolism
jav00630  Glyoxylate and dicarboxylate metabolism
jav00640  Propanoate metabolism
jav00670  One carbon pool by folate
jav00785  Lipoic acid metabolism
jav01100  Metabolic pathways
jav01110  Biosynthesis of secondary metabolites
jav01120  Microbial metabolism in diverse environments
jav01200  Carbon metabolism
jav01210  2-Oxocarboxylic acid metabolism
jav01240  Biosynthesis of cofactors
Module
jav_M00009  Citrate cycle (TCA cycle, Krebs cycle)
jav_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
jav_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
jav_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:jav00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    OXU80_12140 (lpdA)
   00020 Citrate cycle (TCA cycle)
    OXU80_12140 (lpdA)
   00620 Pyruvate metabolism
    OXU80_12140 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    OXU80_12140 (lpdA)
   00640 Propanoate metabolism
    OXU80_12140 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    OXU80_12140 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    OXU80_12140 (lpdA)
   00310 Lysine degradation
    OXU80_12140 (lpdA)
   00380 Tryptophan metabolism
    OXU80_12140 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    OXU80_12140 (lpdA)
   00670 One carbon pool by folate
    OXU80_12140 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:jav04147]
    OXU80_12140 (lpdA)
Enzymes [BR:jav01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     OXU80_12140 (lpdA)
Exosome [BR:jav04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   OXU80_12140 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 GIDA HI0933_like DAO AlaDh_PNT_C FAD_binding_3 Thi4 Trp_halogenase LpxI_N 2-Hacid_dh_C Lys_Orn_oxgnase 3HCDH_N
Other DBs
NCBI-ProteinID: WAJ30902
LinkDB
Position
2503747..2505198
AA seq 483 aa
MADTYDIIVIGGGPGGYVAAIRAAQLGFKTAVVEREHMGGICLNWGCIPTKALLRSAEIF
HYAEHGANYGLNIPKPSFDIAAVVKRSRGVSAQLNGGVAGLMKKNKIDIIWGQAKITKAG
KGSPVEVEVGEPTKPAVQPQNPVPKGALGHGTYKAGHVIVATGARPRVLPGIEPDGEKIW
TYFEAMKPASMPKSLLVMGSGAIGIEFASFYRTMGAEVTVIELLPQILPVEDAEVAAVAR
KQFEKQGIKILTDAKVAKVVKTAGGVEATVEVGGKSQVLSAEKLISAVGVQGNTEGLNLE
GVGVAIERGIVKVDAYGRTNVEGVYAIGDVAGPPMLAHKAEHEGTICVEAIKGLHPHPME
KSQIPGCTYCQPQVASVGLTEAKAKEAGREVRVGRFKFIANGKAIALGEPEGLVKTIFDA
KTGELLGAHMVGAEVTELIQGFVIAMGLETTEEDLMHTVFPHPTLSEMMHESVLDAYGRV
IHM
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggctgatacctacgacatcatcgtcatcggcggcgggccgggcggctacgtcgcggcg
atccgcgcggcgcagctgggcttcaagacggccgtcgtcgagcgcgagcacatgggcggc
atctgcctcaactggggctgcatcccgaccaaggcgctgctgcgctcggccgagatcttc
cactatgccgagcacggcgcgaactacggcctgaacattcccaagccgtccttcgacatc
gccgcggtggtgaagcgctcgcgcggcgtctcggcgcagctcaacggcggcgtcgccggg
ctgatgaagaagaacaagatcgacatcatctggggccaggccaagatcaccaaagcgggc
aagggcagtccggtcgaggtcgaggttggcgagccgacgaagccagccgtccagccgcag
aacccggtgccgaagggcgcgctcggccacggcacctacaaggctggccacgtcatcgtg
gcgacgggggcccgtccgcgcgtcctgccgggcatcgagccggatggcgaaaagatctgg
acctatttcgaggcgatgaagccggcgtccatgccgaagtcgctgctcgtcatgggctcg
ggcgccatcggcatcgaattcgcctccttctaccgcaccatgggcgcggaggtgacggtg
atcgagctcctgccgcagatcctgcccgtcgaggacgccgaggtcgcggcggtcgcacgc
aagcagttcgagaagcagggcatcaagatcctgaccgacgcgaaggtcgccaaggtcgtg
aagaccgcgggcggcgtcgaggcgacggtcgaggtcggcggcaaatcccaggtgctgagt
gccgagaagctgatttccgcagtcggcgtccaaggcaacaccgaggggctgaacctcgaa
ggcgtcggcgtcgcgatcgagcgcggcatcgtcaaggtcgacgcctacggccgcaccaac
gtcgagggcgtctacgccatcggcgacgtcgcgggcccgccgatgctggcccacaaggcc
gagcacgagggcacgatctgcgtcgaggcgatcaagggcctgcacccgcacccgatggag
aagtcgcagatccccggctgcacctattgccagccgcaggtggcgagcgtcggcctgacc
gaagccaaggccaaggaagcgggccgcgaggtcagggtcggccgcttcaagttcatcgcc
aacggcaaggccatcgcgctcggcgagcccgaggggctcgtgaagacgatcttcgatgcc
aagaccggcgaactgctcggcgcccacatggtgggcgcggaagtcaccgagctcatccag
ggcttcgtcatcgctatgggcttggagacgacggaggaggacctgatgcacacggtcttc
ccgcatccaaccctgtccgaaatgatgcacgagagcgtcctcgacgcctacggccgcgtc
attcacatgtga

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