Antarcticirhabdus aurantiaca: OXU80_13295
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Entry
OXU80_13295 CDS
T09604
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jav03032
]
OXU80_13295
03036 Chromosome and associated proteins [BR:
jav03036
]
OXU80_13295
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_13295
DNA replication proteins [BR:
jav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OXU80_13295
Chromosome and associated proteins [BR:
jav03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OXU80_13295
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OXU80_13295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
WAJ31112
LinkDB
All DBs
Position
complement(2749564..2749839)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVAAVAEKSKLSKQDATTAVDSLFDVLQEAMAKGDDVRLVGFGTFSVSRREASKG
RNPSTGAEVDIPARNVARFSPGKGLKDALNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactcgtcgccgccgtcgcggagaagagcaagctgtccaagcaggac
gcgaccacggcggtcgactcgctgttcgacgtgctccaggaagccatggcgaagggcgac
gacgtccgcctcgtcggcttcggcacgttctccgtttcgcggcgcgaggcttcgaagggc
cgcaacccttcgacgggtgccgaggtcgacattcccgcccgcaacgtcgcgcgtttctcg
cccggcaagggcctgaaggacgcgctgaacaagtaa
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