Antarcticirhabdus aurantiaca: OXU80_16655
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Entry
OXU80_16655 CDS
T09604
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav03420
Nucleotide excision repair
jav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OXU80_16655
03430 Mismatch repair
OXU80_16655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_16655
Enzymes [BR:
jav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OXU80_16655
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OXU80_16655
MMR (mismatch excision repair)
Other MMR factors
OXU80_16655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WAJ31506
LinkDB
All DBs
Position
3438930..3441482
Genome browser
AA seq
850 aa
AA seq
DB search
MAARGGPVAQGGPHYLAGLNAEQRAAVETTEGPVLVLAGAGTGKTRVLTTRIAHILSLGL
AFPSQILAVTFTNKAAREMRQRIGLLVGEQVEGMPWLGTFHSIGVKILRRHAELVGLKSN
FTILDTDDQLRLVKQLIQAENLDDKRWPARTFAQMMDGWKNKGLTPDTIPEGDARAFGNG
KGRELFRAYQDRLLQLNAADFGDLLLHPIRIFRENSDVLADYHRRFRYILVDEYQDTNVA
QYLWLRLLAQRPKTGDAPSPPPNVCCVGDDDQSIYGWRGAEVDNILRFEKDFPGATVIRL
ERNYRSTAHILGAAAHLIAHNEDRLGKTLFTDTSSPEDERVAVNAGWDSEEEARAVGEEI
EQLQRRGHKLNDMAILVRASFQMREFEDRFVTLGLNYRVVGGPRFYERQEIRDAMAYLRC
VCQPADDLAFERIVNVPKRGLGDATVRQIHDHARGNGTPMIAAALEMVETEELKPKPRNA
LRSLVFNLRRWSELLPTTRHTDLAEMILEESGYTEMWQNDRSAEAPGRLENLKELVRSME
EYESLPGFLEHVALVMDTEQNAESDAVSLMTLHSAKGLEFETVFLPGWEEGLFPHQRALD
EGGRSGLEEERRLAYVGITRGKKRVKIWFVSNRRIHGLWQSTIPSRFLDELPEAHVEVME
ANTSYGGYGGYGASRWDGGASFASGGYRTPGARRAAAAASGGSYGDGWGGGRTREISYEE
DGVKAKADRYAQAAGLGDFSSSENSGFAGRMTPDRGPALGRQAARGSNQPPSRGAGLYSS
ARQGGPREIAGELIAKSVVPPEESRYAVGTRVFHQKFGPGTVASVEGNKLTVDFDKAGQK
RVLDGFVTPI
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgcggcggcccggtggcgcagggcgggccgcactacctcgccggtctcaat
gccgagcagagggccgccgtcgaaacgaccgaaggcccggttctcgtcctcgcgggcgcc
ggcaccggcaagacgcgggtgctcaccacccgcatcgcccacatcctctcgctcggcctc
gcctttccctcccagatcctcgccgtcaccttcaccaacaaggcggcgcgcgagatgcgc
cagcgcatcggcctcctcgtcggcgagcaggtcgagggcatgccctggctcggcaccttc
cactccatcggcgtgaagatcctgcgccgccacgccgagctggtgggcctgaagtccaac
ttcaccatcctcgacaccgacgaccagctccgcctcgtcaagcagctgatccaggccgag
aacctcgacgacaagcgctggccggcccgaaccttcgcccagatgatggacggctggaag
aacaaggggctgacgcccgacacgatccccgaaggcgacgcgcgcgccttcggcaacggc
aagggccgcgagctcttccgcgcctaccaggaccgcctcctgcagctcaacgccgccgac
ttcggcgacctcctcctccacccgatccgcatcttccgcgagaactcggacgtcctcgcc
gactaccaccgtcgcttccgctacatcctcgtcgacgagtatcaggacaccaacgtcgcc
cagtacctctggctgcgcctcctcgcccagcggccgaagacgggggatgccccgtcaccc
ccgcccaacgtctgctgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgcg
gaggtcgacaacatcctgcgcttcgaaaaggattttcccggcgccaccgtgatccgcctg
gagcgcaactaccgctccaccgcccacatcctgggcgctgccgcccacctcatcgcccac
aatgaggaccgcctcggcaagacgctgttcaccgacacctcctcgcccgaggacgagcgc
gtggccgtgaacgccggctgggattcggaggaggaggcgcgcgccgtcggcgaggagatc
gagcagctccagcggcgcggccacaagctcaacgacatggcgatcctcgtgcgcgcttcc
ttccagatgcgcgagttcgaggaccgcttcgtgaccctcggcctcaactaccgcgtcgtc
ggcggcccgcgcttctacgagcggcaggaaatccgtgacgcgatggcgtatctgcgctgc
gtctgccagcccgccgacgacctcgccttcgagcgcatcgtcaacgtgccgaagcgcggc
ctcggcgacgcgaccgtgcgccagatccacgaccacgcgcgcggcaacggcacgccgatg
atcgccgccgccctcgaaatggtcgagacggaggagctgaagcccaagccgaggaacgct
ttgcgctcgctcgtcttcaacctgcgccgctggtccgagcttcttcccaccacccgccac
acggatctcgccgagatgatcctggaggagtccggctataccgagatgtggcagaacgac
cgctccgccgaggctcccggacgcctggagaacctgaaagaactcgtgcgctccatggag
gagtacgagtccctccccggcttcctggagcacgtcgcgctggtcatggacacggagcag
aacgccgagtccgacgccgtctcgctgatgacgctccactccgccaagggcctggagttc
gagaccgtcttcctgcccggctgggaggaaggcctctttccccaccagcgcgccctcgac
gagggcggccgctcgggcctcgaggaagagcggcgcctggcctatgtcggcatcacccgc
ggcaagaagcgggtgaagatctggttcgtctcgaaccgtcgcatccacggcctctggcaa
tccacgatcccctcgcgcttcctcgacgagctgcccgaggcccatgtcgaggtcatggag
gccaacacctcctacggcggatatggcggctacggcgcctcgcgctgggacggcggcgcg
tccttcgcgagcggcggctatcgcacgcccggcgcccgccgggccgcggccgccgcatcg
ggcggctcctacggcgacggctggggcggcgggcgcacccgcgagatttcctacgaggag
gacggcgtgaaggccaaggccgaccgctacgcgcaggccgccggcctcggcgacttctcg
tcgtccgagaattcgggcttcgccggccgcatgacgcccgaccgcggcccggccctcggc
cgccaggccgcccgcggctccaaccagccccccagccgcggcgccggcctctactcctcg
gcgagacaaggcggcccgcgcgagatcgcaggcgagctcatcgcgaaatccgtcgttccc
ccggaggaaagccgctacgccgtcggcactcgcgtcttccaccagaagttcggccccggc
accgtcgcctccgtcgaaggcaacaagctcaccgtcgacttcgacaaggccggccagaag
cgcgtcctcgacggcttcgtcacgccgatctga
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