Antarcticirhabdus aurantiaca: OXU80_16800
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Entry
OXU80_16800 CDS
T09604
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav00470
D-Amino acid metabolism
jav00550
Peptidoglycan biosynthesis
jav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OXU80_16800 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OXU80_16800 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jav01011
]
OXU80_16800 (murD)
Enzymes [BR:
jav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
OXU80_16800 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
jav01011
]
Precursor biosynthesis
Amino acid ligase
OXU80_16800 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
KARI_N
Motif
Other DBs
NCBI-ProteinID:
WAJ26530
LinkDB
All DBs
Position
complement(3473010..3474404)
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AA seq
464 aa
AA seq
DB search
MIPATVFAGRTLALFGLGGSGLATAKALQEGGASVLAFDDNPDSVARADSEGVTTGSLRE
ADWSGFDALVLSPGVPLTHPKPHWTVDLAHAAGIPVIGDVELFSRERERHAPLAPFIAIT
GTNGKSTTTALIAHCLTSAGRDTQLGGNIGVAVMTLDPPAEHRHYVVECSSYQIDLAPTL
RPTVGILLNLSPDHLDRHGTMEDYAAIKARLVRGSRTAIVGVDDDHSRAIADWLTVDNHR
ILRISQNEPVSDGVFLDGRMLIRRQPGCADRLFSLEGIGSLRGRHNGQNAAAAVAALESV
GLSDAEIQNGLNTFPGLAHRMEQVATAGRVLFVNDSKATNAEAAAPALASFERIHWIAGG
LPKEGGIASLEPFFGRIAKAYLIGEAAPAFAATLGERIPYEISGSLDVAVSHAARDAGAT
GEDEVVLLSPACASFDQFRNFEKRGEAFRDAVRSLDGAMPIGKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgattcccgccaccgtctttgccggccgcacgctcgcgctgttcgggctcggcggctct
ggactggccaccgccaaggccctccaggagggcggggcgtcggttctcgccttcgacgac
aatcccgacagcgtcgccagggcggacagcgaaggggtgacgaccggctcgctgcgcgag
gccgactggagcggcttcgacgcgctggtgctctcacccggcgtgccgctcacgcatccc
aagccgcattggacggtggacctcgcccacgccgcgggcatcccggtgatcggcgacgtc
gagctgttcagccgcgagcgcgagcgccacgcgccgctcgcacccttcatcgccatcacc
ggcacgaacggcaagtcgaccaccacggcgctgatcgcccactgcctgacgtccgcgggt
cgcgacacgcagctcggcggcaacatcggtgtcgcggtgatgacgctcgatccgcccgcc
gagcaccgccactacgtcgtcgagtgctcctcctaccagatcgacctcgccccgacgctc
cggccgacggtcggcatcctcctcaacctgtcgcccgaccatctcgaccggcacggcacg
atggaggattacgccgcgatcaaggcccggctcgtgcgcggcagccggacggccatcgtc
ggcgtcgacgacgaccattcccgcgcgatcgccgactggctgaccgtcgacaaccaccgc
atcctgcgcatctcgcagaacgagccggtctccgacggcgtgtttctcgacggccgcatg
ctgatccggcgccagccgggctgcgccgaccgcctgttcagcctggaagggatcggctcg
ctgcgcggtcgccacaacgggcagaacgcggccgccgcggtggctgcgctcgaaagcgtt
ggtttaagcgacgccgaaatccagaacgggctcaacacctttccgggactggctcaccgg
atggagcaggtcgcgaccgcaggccgggtcctgttcgtcaacgactccaaggcgacaaat
gccgaagccgcggcgccggctctggcaagcttcgagcgcatccactggatcgccggaggg
cttccaaaggagggcggcatcgcctcgctcgagcccttcttcggacgcatcgccaaggca
tacctgatcggcgaggcggcaccagccttcgccgcgactcttggtgaacgaattccttac
gagatttcgggtagtctcgacgtcgcggtgagccacgcggctcgcgacgccggcgcgacg
ggcgaggacgaggtcgtcctcctgtcgccggcctgcgcgagcttcgaccagttccgcaat
ttcgagaagcgcggcgaggcgttccgggatgccgtccggagcctcgacggggcgatgccc
atcggcaaggagtaa
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