Antarcticirhabdus aurantiaca: OXU80_17375
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Entry
OXU80_17375 CDS
T09604
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_17375
Transporters [BR:
jav02000
]
Other transporters
Pores ion channels [TC:
1
]
OXU80_17375
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
MS_channel_TM1
Motif
Other DBs
NCBI-ProteinID:
WAJ26635
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Position
3587186..3589597
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AA seq
803 aa
AA seq
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MIRNLSALAPALAFWLLAALPSFAQTPSSPTTAPPPAASVPATTAADLQAVRDLIGLLQD
DTRRAGLVEELRSLEAAMARGGADPSAAAPAAGAGAGDAPAEASGDAPAAAGDAQSAETA
APTDGEAGAETPAEAVLSEDGLISVLSSSLADTGRDLRDAVVEGDVEKRLVDAVGEIGDR
AGRSFGGQATLNFLGWALPGIAIVTGLLVLLFKNGWLRERRRLREPPKKTGLGIAAAVGR
KALFGFLPVILAIGLASSWAGLFAPTFREGQLFLALFSPLFAALIVRQVGTYLLLSLGPS
RGWRLISYAEKRLLPWLASLAAVAALSSMLREFPVRAAIGFNVTAVAAFLVDVALAGFTC
AFVLRHRLTVRSLLVHRRTRRQKYAEDGSKGSGILDSTLRFFGDYWHVLALAFILANLAA
RLLGLGGNDFILQSTTALAWVVAGVATLALVNALFRRAALNQKKRPSLRRALIGRYLDIL
HVVLQITVAVYVALQAIDVWGFDLSAWLASENGQRIVRPATSLVLIPAVIYAIWVTIDTI
IEHAISPTDSRGRVRAHSGRVRTLLPLIRNLVFVVLSVIAVIAILANIGVDVTPLLAGAG
VVGLAFSFGAQQLVQDVITGFFIIFEDTIAIGDTVTAGDKSGVVEGMTIRTLRLRDGNGA
LHSIPFSQIKALQNSSRGYGVFGITVAIAYGADADKTMDIMREVGAELQSDPRFGREMLA
PIEIWGVDGFSADGVTIKGALRCLPLQQWGVGREFNRRLKKRLDAAGIEFQNAEQRLRID
GAAQRLGPPANNPGPVAAAQPAE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaacctttcggcgctcgcgccggctctcgcgttctggctcctcgcagccctg
ccctccttcgcgcagaccccgtcctcccccaccacggcccccccgccggccgcttcggtc
cccgcgacgacggccgcggatctccaggccgtgcgcgatctgatcgggcttctgcaggac
gacacgcggcgcgccgggctcgtcgaggagctccgctcgctggaagcggcgatggccagg
ggtggcgcggatccctcggctgcggctcccgctgcgggcgcgggcgcgggcgacgcgcca
gcggaagcctcgggcgatgcgccggcggcggcgggagacgcccagtcggccgagaccgcg
gctccgactgatggcgaagcgggtgccgagaccccggccgaggcggttctgtcggaagac
gggctgatcagcgtcctgtcgtcgagcctcgccgacacgggccgcgacctgcgcgatgcc
gtggtcgagggcgatgtcgagaagcggctcgtggatgcagtcggcgagatcggcgaccgg
gccggccgcagcttcggcgggcaggcgacgctcaacttcctcggctgggcgctgcccggc
atcgcgatcgtcaccggccttctcgtccttctcttcaagaacggctggctgcgcgagcgg
cggcggttgcgcgagccgccgaagaagaccggcctcggcatcgccgcggcggtcggccgc
aaggcgctcttcggcttcctgccggtgatcctggcgatcggtctcgcgtcgagctgggcc
ggtctcttcgcgccgaccttccgtgagggccagcttttcctggcgctgttctcgcccctc
tttgccgcgctgatcgttcggcaggtcggcacctaccttctcctcagcctcggcccgtcc
cgcggctggcggctgatcagctatgccgagaagcggcttctgccctggctcgcctcgctg
gcggcggtcgccgcgctgtcgagcatgcttcgcgagtttccggttcgcgccgccatcggc
ttcaacgtcaccgcggtcgccgcctttctggtcgacgtagcgctggcgggcttcacctgc
gccttcgtcctgcgccaccggctgacggtgcgcagccttctcgtccaccggcgcacccgc
cggcagaaatacgccgaggacgggtccaagggctcgggcatcctcgactcgacgctgcgc
ttcttcggcgactactggcacgtcctggcgctcgccttcatcctcgccaacctcgccgcg
cgcctgctcggcctcggcggcaacgacttcatcctgcagagcacgacggcgctggcctgg
gtcgtggcaggcgtggcgacgctggcgctcgtcaacgcgctcttccggcgcgctgcgctc
aaccagaagaagcgcccgtcgctgcgccgcgccctgatcggccgctacctcgacatcctg
cacgtcgtcctgcagatcaccgtcgcggtctacgtcgcgctccaggcgatcgacgtctgg
ggtttcgacctgtcggcctggctcgcctcggagaacggccagcggatcgtccggccggcg
acctcgctcgtcctcatccccgccgtgatctacgcgatctgggtgaccatcgacacgatc
atcgagcacgccatcagcccgacggacagccgcgggcgcgtgcgggcccattcgggccgg
gtgcgcacgctcctgccgctgatccgcaacctcgtcttcgtggtgctctcggtgatcgct
gtgatcgcgatcctcgccaatatcggcgtcgacgtgaccccgctgctcgccggtgccggt
gtcgtcggcctcgccttctccttcggcgcgcagcagctcgtccaggacgtcatcacgggc
ttcttcatcatcttcgaggacaccatcgccatcggcgacacggtgaccgctggcgacaag
agcggcgtcgtcgagggcatgacgatccgcacgcttcgtctgcgcgacggcaacggcgcc
ctgcactcgatccccttcagccagatcaaggcgctgcagaactcctcgcgcggctacggc
gtcttcggcatcaccgtcgcgatcgcctacggcgccgacgccgacaagacgatggacatc
atgcgcgaggtcggcgcggagctgcagagcgatccgcgcttcggccgcgagatgctggcg
cccatcgagatctggggcgtcgacggcttctcggccgacggcgtgacgatcaagggcgcg
ctacgctgcctgccgctgcagcaatggggggtcgggcgcgagttcaaccggcgcctgaag
aagcgcctggacgcggccggcatcgagttccagaacgccgagcagcgcctccgaatcgac
ggcgccgcccagcgcctggggccacccgccaacaatccgggacccgtggcggcggcgcag
ccggcggagtaa
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