KEGG   Antarcticirhabdus aurantiaca: OXU80_18235
Entry
OXU80_18235       CDS       T09604                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
jav  Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:jav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jav03400]
    OXU80_18235
Enzymes [BR:jav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OXU80_18235
    5.6.2.6  RNA 3'-5' helicase
     OXU80_18235
DNA repair and recombination proteins [BR:jav03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    OXU80_18235
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WAJ31521
LinkDB
Position
3780966..3783518
AA seq 850 aa
MLPPRFRAWFEAKGWAPRDHQLDLLARAEAGRSVLLIAPTGAGKTLAGFLPSLVSLARRK
RAAPGTRPRGVHTLYVSPLKALAADIERNLQTPVDGIGLKISVETRTGDTSQVRRQRQKL
KPPDILLTTPEQLALLIAAKDARDFFADLETVVFDELHSLVASKRGHLLALGLARLRRLA
PGLKTVGLSATVSDPDELRAWLVPQVSMAETEEADEHGELVQPLSDLITVEGGAKPDISI
LASEARVPWQGHMARYAMPEIYEAIKAHKTTLLFVNTRSQAELLFQELWRINEDTLPIAL
HHGSLDLGQRKRVEAAMSRNELRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIG
RANHRMDEPSKAILVPANRFEVMECQVALDANYLGHQDSPPMRAGCLDVLAQHVLGMAVA
EPFRADDLFAEVCTALPYRDLDRPTFDQVIDFVATGGYALRVYEQYAKIRLTEDGTWRVT
HPRIAQNYRMNAGTIIESETLSVRLIRRKTTSAIKRGGPVLGKIEENFLETLSPGDTFLF
AGQVLAFQGIHEMECLVTKTQDDEAKVPYYGGSKFPLTTYLAAQVRAMLADPARWGALPD
QVRDWLAIQSRKSAIPGADELLIETFPVGNRFFMVAYPFEGRLAHQTLGMLLTRRLERAG
AKPLGFVATDYALSIWGRGDMGAMIASDRISLDALFDEDMLGDDLEAWMADSWMLKRSFR
QCAVIAGLVPKRFPGQEKTGRQVTVSSDLVYDVLRAHEPDHVLLKATWADAATGLLDVAR
VSDLLARIRHHIRHQDLEEISPLAVPIMLEAGRERIDGEGSDELLSVAAEAALVEKALSE
KNKFYSTKWT
NT seq 2553 nt   +upstreamnt  +downstreamnt
atcctgccgccgcgctttcgggcctggttcgaggcgaagggttgggcgccacgcgaccac
cagctcgacctcctggcccgagccgaggccgggcgctccgttctcctcatcgcgccgacg
ggagcgggcaagacgctcgccggtttcctgccctcgctcgtctcgctcgcgcgccgcaag
cgcgccgccccaggcacgcgcccgcgcggcgtccacacgctctatgtctcgccgctcaaa
gcccttgccgccgatatcgagcgcaacctgcagacgcccgtcgacggcatcggcctgaag
atatcagtcgagacccgcaccggcgacacgtcccaggttcgccgccagcgccagaagctc
aaacccccggacatcctgctcacgacccccgagcagctcgcgctcctcatcgccgccaag
gacgcgcgcgacttcttcgccgatctcgaaaccgtcgtcttcgacgagctgcactcgctc
gtcgcgtccaagcgcgggcacctcctcgcgctcggtctcgcgcgcctgcgccgcctcgcg
ccgggcctgaagaccgtcggcctctccgcgaccgtgtccgacccggacgagctgcgcgcc
tggctggtgccgcaggtctcgatggccgagacggaggaggccgacgaacacggcgaactc
gtccagccgctctccgacctcatcaccgtcgagggcggcgccaagcccgacatctcgatc
ctggcatcggaagcgcgcgtgccctggcagggccacatggcgcgctacgccatgcccgag
atctacgaggcgatcaaagcgcacaagacgacgctgctcttcgtcaacacgcgctcccag
gccgaactcctgttccaggagctgtggcggatcaacgaggacacgctgccgatcgcgctc
caccacggctcgctcgatcttggccaacgaaagcgcgtcgaggcggcgatgtcgaggaac
gagctgcgcgcggtggtcgcgacctcgacgctggacctcggcatcgactggggcgacgtc
gacctcgtcgtccatgtcggcgcgcccaagggcgcctcgcggctcgcgcagcgcatcggg
cgcgccaaccaccgcatggacgagccctccaaggcgatcctcgtccccgccaaccgcttc
gaggtcatggagtgccaggtggcgctcgacgccaactatctcggccaccaggactcgccg
ccgatgcgggcgggttgcctcgacgtcctcgcccagcacgtcctcggcatggcggtggcc
gagcccttccgcgccgacgacctcttcgcggaggtgtgcacggcgctcccttatcgcgac
ctcgaccggccgaccttcgaccaggtgatcgacttcgtcgcgaccggcggctacgcgctg
cgggtctacgagcaatacgccaagatccgtctcaccgaggacggcacctggcgcgtgacc
catccgcggattgcgcagaactaccggatgaacgccggcacgatcatcgaatcggaaacc
ctgtccgtgcgcctcatccgccgtaagacgacgtcggcgatcaagcgcggcgggccggtg
ctcggcaagatcgaggagaacttcctcgaaacgctgtcgcccggcgacaccttcctcttc
gcgggacaggttctcgccttccagggcatccacgagatggaatgcctcgtcaccaagacg
caggacgacgaggcgaaggtcccctattacggcggctcgaagttcccgctgaccacctac
ctcgccgcccaggtgcgcgcgatgctcgccgatcccgcgcgctggggcgcgctgccggat
caggtgcgcgactggctcgccatccagagccgcaagtccgcgatccccggcgcggacgag
ctcctcatcgagaccttcccggtcggcaaccgcttcttcatggtggcctatcccttcgag
ggccgcctcgcccaccagacgctcggcatgctgctgacgcgccgcctggagcgcgcgggc
gccaagcccctcggcttcgtcgcgacggactacgcgctgtcgatctggggccgaggcgac
atgggcgcgatgatcgcgagcgatcgcatctcgctcgacgcgctgttcgacgaggacatg
ctcggcgacgacctggaagcctggatggcggattcctggatgctgaagcgctccttccgc
cagtgcgccgtgatcgccggcttggtgccgaagcgctttcccggccaggaaaagaccggc
cggcaggtcacggtctcctccgacctcgtctacgacgtgctgcgcgcccacgagcccgac
cacgtcctcctgaaagcgacctgggcggatgcggcgacgggcctcctcgacgtcgcgcgc
gtgtccgacctcctcgcccgcatccgccaccacatccgccaccaggacctggaggagatc
tcccccctcgccgtcccgatcatgctggaggccgggcgcgagcgcatcgacggcgaaggc
tcggacgagctcctgtcggtcgcagccgaagccgctctggtggagaaggcgctgagcgaa
aagaacaagttctactcgaccaaatggacgtga

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