Antarcticirhabdus aurantiaca: OXU80_19335
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Entry
OXU80_19335 CDS
T09604
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav00300
Lysine biosynthesis
jav01100
Metabolic pathways
jav01120
Microbial metabolism in diverse environments
jav01230
Biosynthesis of amino acids
Module
jav_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OXU80_19335 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
jav01002
]
OXU80_19335 (dapE)
Enzymes [BR:
jav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
OXU80_19335 (dapE)
Peptidases and inhibitors [BR:
jav01002
]
Metallo peptidases
Family M20
OXU80_19335 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
TcpQ
Motif
Other DBs
NCBI-ProteinID:
WAJ27001
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Position
3988670..3989872
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AA seq
400 aa
AA seq
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MTIPDPTNPSALLSALIRCPSVTPEEGGALAALEAMLRPLGFAVERPVFSEPDTPNVENL
FARRGETGPHLVFAGHTDVVPPGAAEDWREGPFSGAIRDGFVWGRGAVDMKGGIACFLAA
LGRMAAAGELPATGRISLLITGDEEGPAINGTVKLLDWARNRGERFDACIVGEPTNPAAL
GDMIKIGRRGSLSGHVHVDGVQGHAAYPHLAANPIPLLLALGQSLIDPPLDAGNARFDPS
NLEIVSVDTGNPSLNVIPARARLSFNVRFNDEWSGTTLKAEIERRLTAAAGAMPMREGAQ
APHWRVEWKAPVSDVFLTTDDALARTLSEAVEAVTGRRPALSTSGGTSDARFIKNHCPVA
EFGLVGQTMHKVDERASVADLEQLTEIYRRFVSGWFAARG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacccgatccgacaaacccctccgctcttctctcggccctgatccgctgcccc
tccgtgacgccggaggagggcggcgcgctggccgcgctcgaagccatgctccgccccctc
ggcttcgccgtcgaacgaccggtcttctccgagccggacacgccgaacgtcgagaacctc
ttcgcccgccgcggcgagacggggccgcacctcgtcttcgccggccacaccgacgtcgtg
ccgccgggcgccgcagaggactggcgcgagggcccgttctccggcgcgatccgcgacggc
ttcgtctggggccggggcgccgtcgatatgaagggcggcatcgcctgcttcctggccgcg
ctcggccgcatggcggcggcgggcgagctgccggcgacgggccgcatctcgctgctgatc
accggcgacgaggaagggccggcgatcaacggcacggtgaagcttctcgactgggctcgg
aaccgcggcgagcgcttcgacgcctgcatcgtcggcgagccgaccaatccggcggcgctc
ggcgacatgatcaagatcggccgccgcggctccttgtccggccacgtccacgtcgacggc
gtccaggggcacgcggcctatccgcacctcgccgccaatccgatcccgctgctcctcgcg
ctcgggcagagcctgatcgacccgccgctggatgcgggcaacgcgcgcttcgacccgagc
aacctcgagatcgtctccgtcgacacgggcaatccctcgctgaacgtcattccggcacgc
gcgcgcctgtccttcaacgtccgcttcaacgacgaatggagcgggaccacgctgaaggcc
gagatcgagcgccggctgacggccgccgcgggcgccatgccgatgcgggagggtgcgcag
gctccacactggcgggtcgaatggaaggcgcccgtctccgacgtattcctgacgacggac
gacgcgctggcgcgcaccctgtcggaggcggtcgaggccgtcaccgggcgccggccggcg
ctctccacctccgggggcacctcggacgcgcgcttcatcaagaaccactgtcccgtcgcc
gagttcggcctcgtcggacagaccatgcacaaggtggacgagcgggcgagcgtcgccgat
ctcgagcagctgaccgagatctaccgtcgtttcgtgtccggctggttcgccgcgagagga
taa
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