Antarcticirhabdus aurantiaca: OXU80_19660
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Entry
OXU80_19660 CDS
T09604
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jav03021
]
OXU80_19660 (rpoH)
Transcription machinery [BR:
jav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OXU80_19660 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LysM
Motif
Other DBs
NCBI-ProteinID:
WAJ27057
LinkDB
All DBs
Position
4059152..4060072
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AA seq
306 aa
AA seq
DB search
MAQMNLPSIASGEGGLNRYLEEIRRFPMLEPQEEYMLAKRYAEHDDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKRFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRKMKSRIQALDEGDLRPDQVQQIATQLGVTEEDVISMNRRL
SGDASLNAPIRATEGESGEWQDWLVDTSENQEDILVQQDELDQRRSMLHSAMGVLNDRER
RIFEARRLSEDPLTLEALSGEFDISRERVRQIEVRAFEKVQKAVRDTAEAAKRALRPVDS
GASAAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatgaatctgcccagcattgcctcgggcgaaggcggcctgaaccgctacctg
gaagagatccgcaggttccccatgctggagccgcaggaagaatacatgctcgccaagcgc
tatgccgagcacgacgaccgcgacgccgcgcacaagctggtgacgagccatctgcgcctc
gtggccaagatcgccatgggctatcgcggctacggcctgccgatcggcgaggtcgtgtcg
gagggcaatgtcggcctgatgcaggccgtgaagcgcttcgacccggagcggggcttccgc
ctcgccacctacgccatgtggtggatcaaggcctcgatccaggagtacattctgcgctcg
tggagcctcgtgaagatgggcaccacggccaaccagaagcgcctgttcttcaacctgcgc
aagatgaagagccgcatccaggccctcgatgagggagacctgcggcccgatcaggtgcag
cagatcgcgacccagctcggcgtgaccgaggaggacgtgatctcgatgaaccgccgcctg
tccggcgacgcctcgctgaacgcgccgatccgcgcgaccgagggcgagtcgggcgagtgg
caggactggctggtagacacctccgagaaccaggaggacatcctcgtccagcaggacgag
ctcgatcagcgccgctcgatgctgcactcggccatgggcgtcctgaacgaccgcgagcgc
cgcatcttcgaggcgcggcgcttgtcggaggacccgttgacgcttgaagccctgtcgggc
gagttcgacatcagccgcgagcgcgtgcgccagatcgaggtgcgcgccttcgagaaggtg
cagaaggcggtgcgcgacaccgccgaggccgccaagcgcgctctgcgcccggtcgatagc
ggcgcatccgccgccgcctga
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