Antarcticirhabdus aurantiaca: OXU80_20370
Help
Entry
OXU80_20370 CDS
T09604
Name
(GenBank) OmpA family protein
Organism
jav
Antarcticirhabdus aurantiaca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
WAJ27190
LinkDB
All DBs
Position
4192524..4194653
Genome browser
AA seq
709 aa
AA seq
DB search
MPSSRLQRLTLVLLLGASFAPAPLWARTAMPDLGPAAFPARPAPLLMAQEDGGEYVEEPA
YEEPVQDEPAYEEPAYEEPAAEEPVYEEPAQDEPAYEEPAPSEEPAYEEPVQEEPAYEEP
AQEEPVFEEEAPDEPTYEEPAPIEEAAPDEPAYEEPAPAEEPSFEEQQAAEPAAEEPAVE
EEQQAEEPAASEPAADEPVEAETATDEPQAEEPASEDAAADPDAADADAAAADEAPADAA
EEPAQADAASESDTGAATEESASDESPAADDAAVEATVEAEAGEPLIEEAPDAPEEAETV
LADEGLAEAAVSPDEIAADVAAAAEEAPELDADGEIAETLPVGEDVAPQDVAPLFDSAKL
DEAPQAEPDAASEAPPPTSDAAVQAFALPQSFAEERFAPGETLATPPQFAQPSGDTTVIV
NETNTTINTTTINNTVIYESNDTLIVNDYRGYEERLTAWGYDDFAYRRLDGGYYSEAATN
RDGSVVTTVYDAYGNIVERTYYDRYGNPYVLSWYDVSAGPITYEDVGRRLPPLRPRFPAR
YYVLAYEDTDADEVYRFLSKPPVEQARRLYSIDEVKRSARLRDTLPRVELGKLSFATGSA
KIDKRQAQGLKGMAAAMLKQIRANPAETFLIEGHTDAVGSARDNLVLSDRRARAVAEALT
RYYGVPAQNLYTQGYGEDFLKVKTNGASQANRRVTVRRTTPLVTAAKGR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctcacgcctgcagcgcctgacgctcgtcctccttctcggcgcgagcttcgcg
cccgccccgctctgggcgcgcacggccatgcccgatctcggcccggccgccttcccggcc
cggccggctcccctcctgatggcccaggaggacggtggcgaatacgtcgaggagccggct
tacgaagagcccgtccaggacgagccggcctacgaggaaccggcctacgaggagccggcg
gccgaggagcccgtttacgaggagccggctcaggacgaaccggcctatgaggaacccgct
ccctccgaggagcccgcctacgaagaaccggttcaggaagagcccgcttacgaggagccc
gcccaggaggagccggtcttcgaggaggaggctccggacgagccgacctacgaggagccc
gcccctatcgaggaggcggctccggacgagccggcctacgaggagcccgcgcccgccgag
gagccgtccttcgaggaacagcaggcggcggagcctgcggccgaggagcccgccgtcgaa
gaggaacagcaggcggaagagcccgccgcgagcgagccggcggccgacgagccggttgaa
gccgagaccgcgacggacgagccgcaggccgaggagccggcgagcgaggatgccgccgcc
gatcccgatgcagccgatgccgacgcagccgccgccgacgaagcgcccgctgatgccgcg
gaggaacccgcgcaagccgatgccgcgtcggaatccgacacgggcgccgcgaccgaggag
agcgcgagcgatgagtcccccgcggccgacgacgcggccgtcgaggccacggtggaagcg
gaagccggcgagcccctgatcgaagaggctcccgacgcgccggaagaagcggaaaccgtt
ctcgccgacgaggggcttgccgaggcggcggtgtcgcccgacgaaatcgccgccgacgtc
gcagctgcggccgaggaagcgccggaactcgacgcggacggcgagatcgccgaaacgctg
cccgtgggcgaggacgtcgccccgcaggacgtcgccccgctcttcgacagcgccaagctg
gacgaggcgccgcaagccgagcccgacgcggccagcgaggcgcccccgccgacctcggac
gcggcggttcaggccttcgccctgccccagagcttcgccgaggaacgcttcgcccccggc
gagacgctggcgacgccgccgcagttcgcccagccctccggcgacacgacggtgatcgtc
aacgagaccaacacgacgatcaacaccaccaccatcaacaacacggtcatctacgagtcg
aacgacacgctgatcgtcaacgactaccgcggctacgaggagcggctgaccgcctggggc
tacgacgacttcgcctatcggcggctcgacggcggctactactcggaagcggcgaccaac
cgcgacggctcggtggtgacgacggtctacgacgcctacggcaacatcgtcgagcggacc
tattacgaccgctacggcaatccgtacgtcctgtcctggtacgacgtttcggccggtccc
atcacctacgaggacgttggccggcgcctgcccccgctgcgcccgcgcttccccgcccgc
tactacgtcctcgcctacgaggataccgacgcggacgaggtctaccgcttcctgtcgaag
ccgccggtggagcaggcgcggcgcctctactcgatcgacgaggtcaagcgctcggcccgc
cttcgcgacacgctgccccgcgtcgagctcggcaagctgagcttcgccacgggctcggcc
aagatcgacaagcgccaggcgcaggggctgaagggcatggcggccgcgatgctgaagcag
attcgcgccaacccggccgagaccttcctgatcgagggccacaccgacgccgtcggcagc
gcccgcgacaacctcgtcctgtcggaccggcgcgcccgcgccgttgcggaggcgctgacg
cgctattacggcgtgccggcgcagaacctctacacgcagggctacggcgaggacttccta
aaagtgaagacgaacggagcctcccaggccaatcgtcgcgtcacggtgcgccgcacgacg
ccgctcgtcaccgccgcgaaggggcgctga
DBGET
integrated database retrieval system
