Antarcticirhabdus aurantiaca: OXU80_21035
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Entry
OXU80_21035 CDS
T09604
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
jav
Antarcticirhabdus aurantiaca
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jav03009
]
OXU80_21035
Enzymes [BR:
jav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
OXU80_21035
Ribosome biogenesis [BR:
jav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OXU80_21035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Cons_hypoth95
Methyltransf_25
TRAM
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
WAJ27311
LinkDB
All DBs
Position
4334446..4335705
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AA seq
419 aa
AA seq
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MSVAISRDARALLIERLAAKGDGVGHGADGSLRFVPFTLPGERVTAGGDGPRLHLLSVDV
PSPHRVAPPCPHFGVCGGCDLQHADAETYRAFKRDLVASALAREGVEAEVAPLIPCAPAT
RRRAVFAAQKRPDGRPTFGFFEAETHRVVDIETCKVVTPAIERRIPALRRIAATAIGRKA
PLKITVIDTQVGLDVSLADAAKLTEDARRRVVSMALAEDFARITVDGEVLAESRPPSVSF
GAVAVRPPPGAFLQAVRSAEEAMADLVAAHLAGAKRVADLFCGAGTFALRLAANSAVHGV
ENDAPALAALEAAVRGARGARLKPVTVERRDLFRRPMQPKDLKPFDGLVFDPPRAGAEAQ
ARELAASSVKRVAAVSCNPATLARDLAILTAGGYRVLSVTPVDQFLWSHHVEAVALLER
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgcgatttccagggatgcgcgggcgctgctgatcgagcggctcgccgccaag
ggcgacggcgtgggtcacggggccgacgggagcctgcgcttcgtgcccttcacgctgccg
ggcgagcgggtgacggcgggcggcgacggcccgcgcctccatctcctgtccgtggacgtg
ccttcgccgcaccgcgtcgcgccgccctgcccgcatttcggcgtttgcggcggatgcgat
ctccagcacgccgacgccgagacctaccgcgccttcaagcgcgacctcgtcgcatccgcg
ctcgcccgcgagggcgtcgaggccgaggtggcgccgctgatcccctgtgcccccgcgacg
cgccggcgcgccgtcttcgccgcgcagaagcggccggacgggcgcccgaccttcggcttc
ttcgaggccgaaacccaccgcgtcgtcgacatcgagacctgcaaggtcgtaacccccgcc
atcgagcggcgcatcccggcgcttcggcgcatcgccgccacggcgatcgggcgcaaggcg
ccgctcaagatcacggtgatcgacacgcaggtcgggctggacgtatcgctggccgacgcg
gccaagctcaccgaggacgcccggcgccgcgtcgtttccatggcgctcgccgaggatttt
gcccgcatcaccgtcgacggcgaggtcctggccgagtcgcggccaccgagcgtcagcttc
ggcgcggtcgcggtgcgcccgccgcccggcgcctttctccaggccgtgcgctcggccgag
gaagcgatggccgatctcgtcgcggcgcaccttgccggcgccaagcgcgtcgccgacctg
ttctgcggcgccggcaccttcgcgctgcggctcgccgcgaactcggccgtccacggcgtc
gagaacgacgcgccggcgctcgccgcgctggaggcggcggttcgcggcgcgcgcggcgcg
cggctgaagcccgtcacggtggagcggcgcgacctgttccgccggccgatgcagcccaag
gacctgaagcccttcgacgggctcgtcttcgacccgccgcgcgcgggcgccgaagcgcag
gcgcgcgagctggcggcgtcgagcgtcaagcgcgtcgcggccgtgtcctgcaacccggcg
acgctcgcccgcgacctcgcgatcctgacggccggcggctaccgcgtcctgtccgtcacg
ccggtcgaccagttcctctggtcgcatcacgtcgaggccgtcgcgctcctggagcgctga
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