Antarcticirhabdus aurantiaca: OXU80_23195
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Entry
OXU80_23195 CDS
T09604
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OXU80_23195 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jav03019
]
OXU80_23195 (groL)
03110 Chaperones and folding catalysts [BR:
jav03110
]
OXU80_23195 (groL)
03029 Mitochondrial biogenesis [BR:
jav03029
]
OXU80_23195 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jav04147
]
OXU80_23195 (groL)
Enzymes [BR:
jav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OXU80_23195 (groL)
Messenger RNA biogenesis [BR:
jav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OXU80_23195 (groL)
Chaperones and folding catalysts [BR:
jav03110
]
Heat shock proteins
HSP60 / Chaperonin
OXU80_23195 (groL)
Mitochondrial biogenesis [BR:
jav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OXU80_23195 (groL)
Exosome [BR:
jav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OXU80_23195 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OXU80_23195 (groL)
Exosomal proteins of breast cancer cells
OXU80_23195 (groL)
Exosomal proteins of colorectal cancer cells
OXU80_23195 (groL)
Exosomal proteins of bladder cancer cells
OXU80_23195 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
WAJ27715
LinkDB
All DBs
Position
4778547..4780190
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGRDARERMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMLREVASKTNDKAGDGTTTATVLAQAIVREGAKAVAAGMNPMDVKRGI
DSAVAKVVETLVASARKIETSDEVAQVGTISANGEREIGQMIASAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNAEKMVADLEDAYILLHEKKLSNLQAMLPVLEAV
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLRIAAVKAPGFGDRRKAMLEDIATLTGGQV
ISEDLGIKLENVTLDMLGRAKKVSITKENTTIVDGAGESAQIQARVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVAGGGVALL
RASNALTIKGENADQDAGIAIVRKALQAPVRQIVQNAGGEGSIVVGKLLDNTSTTYGYNA
QTGDYGDMIQFGIVDPVKVVRSALQDAASVAGLLVTTEAMISEAPKKDSGAPAMPGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtgaagttcggccgtgacgcccgcgagcgcatgctgcgcggcgtc
gacatcctcgctgacgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtgatc
gacaagtcgttcggcgctccccgcatcaccaaggacggcgtttccgtcgccaaggagatc
gagctcgaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggcctcgaag
accaacgacaaggccggcgacggcaccaccaccgcgaccgttctcgcccaggcgatcgtc
cgcgagggcgccaaggccgtcgcggccggcatgaacccgatggacgtcaagcgcggcatc
gactcggccgtcgccaaggtcgtcgagacgctcgtcgcctcggcccgcaagatcgagacc
tccgacgaggtcgcccaggtcggcaccatctccgccaacggcgagcgcgaaatcggccag
atgatcgcctcggcgatgcagaaggtcggcaacgagggcgtcatcacggtcgaggaagcc
aagaccgccgagaccgagctcgaagtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcgtgaccaacgccgagaagatggtggccgacctcgaggacgcctacatc
cttctccacgagaagaagctctcgaacctccaggccatgctgccggtgctcgaggccgtc
gtccagtcctcgcgcccgctcctcatcatcgccgaggacgtcgagggtgaggctctcgcg
accctcgtcgtcaacaagctgcgcggcggcctgcgcatcgccgcagtcaaggcgccgggc
ttcggcgaccgccgcaaggccatgctcgaggacatcgccaccctcacgggcggccaggtg
atctccgaggatctcggcatcaagctcgagaacgtcacgctcgacatgctcggccgcgcc
aagaaggtctccatcaccaaggagaacacgacgatcgtcgacggcgccggcgagtcggct
cagatccaggcccgcgtcggccagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctccaggagcgcctggccaagctggcgggcggcgtcgcggtgatccgc
gtcggcggctcgaccgaggtcgaggtcaaggagaagaaggaccgcgtcgacgacgccctc
aacgcgacccgcgcggccgtcgaggaaggcatcgtggccggcggcggcgtggcgctgctg
cgcgcctcgaacgctctgaccatcaagggcgagaacgccgatcaggacgccggcatcgcg
atcgttcgcaaggcgcttcaggctccggtccgccagatcgtccagaacgccggcggcgaa
ggctcgatcgtcgtgggcaagctcctcgacaacacctcgacgacctacggctacaacgcc
cagacgggcgattacggcgacatgatccagttcggcatcgtcgacccggtcaaggtcgtg
cgctcggccctgcaggacgcggcctcggtcgccggtctcctcgtcaccaccgaagccatg
atctccgaggccccgaagaaggactcgggcgccccggccatgcccggcggcggcatgggc
ggcatgggcggcatggacttctaa
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