Antarcticirhabdus aurantiaca: OXU80_24855
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Entry
OXU80_24855 CDS
T09604
Name
(GenBank) PAS domain-containing protein
Organism
jav
Antarcticirhabdus aurantiaca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
HWE_HK
Response_reg
PAS
GAF_2
HisKA
PAS_9
GAF
PAS_10
HATPase_c_2
PAS_8
GAF_3
PAS_7
HisKA_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WAJ28018
LinkDB
All DBs
Position
complement(5131067..5134699)
Genome browser
AA seq
1210 aa
AA seq
DB search
MPKVDRLPDMAEPRSWSSAALFSGSGDVRALGRELDWAATPLGPVQGWSQSLRSTVRTLL
SSQYPMVLTWGPHFTQIYNDAYSKLIGDRHPSGLGADIRVTLAEAWDTLGPMIDRVMATG
VANWTPALPLEMHRSGYREEAYFSVSHAPAENDRGEIVGMLAVCSEVTEQVVGERRLRLL
RELAARAGDAQETVQVARHLAEALGEDRADVPFACLYLRDGDTLALATSQGLSESEEAMA
ASWTSSGEGPWPLDRALAGEAVLVEAVESVLPLTGGAFDDPVTSALCLPIAGAQGAVLGV
LVAGVSPNRALDEGYRSFFELLAAQVSVAVRNARAREDERRRAEELAELDRAKTAFFSNV
SHEFRTPLTLLLGPLEEALAEAPENLAAHRGALGIAHRNALRLLRLVNTLLDFSRVEANR
AQARFEPHDLSSLTADLASNFRSAIETVGLRFSVDVPPLSRPVDVDRDMYETIVLNLLSN
AFKFTHAGSIAVRLRETGEGTVALVVSDTGVGLPGEELQRVFERFHRVDAQAARSHEGTG
IGLALVRQLVELHGGTIRAESDGPGRGTTFTVLLPTEAAGAGVPAASPREASGRPQARAF
AEEALRWLPEASDDAPAAPRPASVPRILLVDDNADMRAYVRRLLGESYDVTTAADGAEAL
DAVGRVQPDLVLSDIMMPNVDGFALLAALRANPATATLPVIFLSARAGEEARVESLTAGA
DDHVVKPFGAQELRARVDGALRLSALRGEAAGRERVLEARLAATQAEAALARSEQQLQSL
TDALPVLISHIGRDLRYRFVNRTYETWFRCRRDDVVGRSVADVVGPAAFAQVKPRIDAVL
AGEHLSFEESVRYPDIGECHVKADFIPARGPDGEVTGFYGLVQDVSEARRQAKRLAESEH
AMRTVLEAVSDGFFALDADWRVTLFNRAAEEALDLRRDEVLGRVFWEAVPGALASPFGEH
LRWAMEERTRLTFEERSPARPDRYVEARIAPTREGGLAASFSDITERKLAERHRELLVNE
LNHRVKNTLAVVQSIAVQSFKGDHGPSDAREAFQGRLLALSDAHSLLTQESWEAAPLARI
VENALRPFRDGHRFDMDGPTIRVGPKAAVSLALAFHELCTNAAKYGALSVPEGRVNIAWS
LEGGETGSMFRLRWAESGGPAVRAPTRSGFGSRLVERGLAAELGGTVELRYPAGGVVCEI
LAPLASVEGR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggttgaccgcttgcccgacatggccgaaccgcgttcctggtcgtccgcggcg
ctgttttccggttccggcgacgttcgggcgctcggacgcgagctcgattgggccgccacg
ccgctcggccctgtgcagggctggtcgcagagcctgcgctccaccgtgcgcacgcttctg
tcctcgcaatacccgatggtcctcacctgggggccgcacttcacgcagatctacaacgac
gcctattccaagctgatcggcgaccggcacccctcggggctgggcgcggacatccgcgtc
accctcgccgaggcctgggacacgctcgggccgatgatcgaccgggtgatggcgacgggc
gtcgccaactggacgccggcgcttccgctcgagatgcaccgctcgggctatcgcgaggag
gcctacttctcggtcagccacgcgccggcggaaaacgatcgcggcgagatcgtcggcatg
ctcgcggtgtgttcggaagtgaccgagcaggtggtcggggagcgccggctgcgcctgctg
cgcgagctcgccgcgcgggctggagacgcgcaggagaccgtccaggtcgcgcgccatctc
gccgaggccctgggcgaggaccgcgccgacgtccccttcgcatgcctttatcttcgcgac
ggcgacacgctcgcgctcgccacgagccagggcctgagcgaatccgaggaggcgatggcc
gcgtcctggacgtcgtcgggcgagggaccctggccgctcgaccgcgcgcttgccggcgaa
gccgttctcgtcgaggccgtcgagagcgtcctgccgctcaccggcggcgccttcgacgat
cccgtgacctcagcgctctgtttgccgatcgcgggggcgcaaggcgccgttctcggcgtt
ctcgtcgcgggcgtctcccccaatcgggcgctcgacgagggctaccgctccttcttcgag
ctcctggcggcccaggtctccgtcgccgtgcgcaatgcccgcgcccgcgaggacgagcgg
cggcgggcggaggagctggccgagctcgaccgggcgaagacggccttcttctcgaacgtg
tcccacgagttcaggacacccctgaccctcctcctcggccccctggaggaggccttggcc
gaggcgcccgagaacctcgccgcccatcgcggcgcgctcggcatcgcccatcgcaacgcg
ctgcgcctgctgcggctcgtcaacacgcttctcgacttctcgcgcgtcgaggcgaaccgg
gcgcaggcgcgcttcgagccgcacgacctgtcctcgctcacggccgatctcgcctccaac
ttccgctctgcgatcgagacggtgggcctgcgcttctcggtcgacgtgccgccgctgtcc
cggcccgtcgacgtcgaccgcgacatgtacgagacgatcgtcctgaacctcctctccaac
gccttcaagttcacccatgccggctcgatcgcggtgcggctgcgcgagacgggggagggg
acggtcgcgctggtcgtgtccgacacgggcgtcggcctgccgggcgaggagctgcagcgc
gtcttcgagcgattccaccgcgtcgacgcgcaggcggcgagaagccacgagggaacgggc
atcggcctcgctctcgtcaggcagctcgtcgagctccacggcggaaccatccgtgccgaa
agcgacggtcccggccgcggcaccaccttcacggtcctcctgcccaccgaagcggccggt
gcgggggtcccggccgcttctcctcgcgaggcgagcgggcgcccgcaggcgcgagccttc
gccgaggaagcgcttcgctggctgccggaggcctcggacgacgctccggccgcgccgcga
ccggcatccgtgccgcgcatcctcctcgtcgacgacaatgcggacatgcgggcctatgtc
cggcgacttctgggcgagagctacgacgtgaccaccgcggccgacggcgcggaagcgctc
gacgcggtcggccgcgtgcagccggacctcgtcctgtcggacatcatgatgcccaacgtc
gacggcttcgcccttctggccgcgctgcgggcgaacccggcgaccgcgaccctgcccgtc
atcttcctgtccgcgcgggccggcgaggaggcgcgcgtcgagagcctgacggcgggcgcc
gacgatcacgtcgtgaagcccttcggcgcgcaggagttgcgcgcccgcgtcgacggcgcc
ctgcgcctgtcggcgctgcgcggcgaggcggcgggccgggagcgggtcctggaggccagg
ctcgccgcgacgcaggccgaggccgcgctcgcccggtccgagcagcagctgcaatccctg
accgacgccctgccggtgctcatctcccatatcggccgggacctgcgctaccgcttcgtc
aaccggacctacgagacctggttccgctgccggcgggacgacgtcgtcggccgctcggtt
gccgacgtcgtcggccccgccgccttcgcgcaggtgaagccccggatcgacgcggttttg
gcgggcgagcatctcagcttcgaggagagcgtgcgctatcccgacatcggcgagtgccac
gtcaaagccgacttcatcccggctcgcgggccggacggcgaggtcaccggcttctacggg
cttgtgcaagacgtgagcgaggcgcgtcgccaggcgaagcggctcgccgaaagcgagcac
gcgatgcgcaccgtcctggaagccgtgtccgacggcttcttcgcgctggacgctgactgg
cgcgtcaccctgttcaaccgcgccgccgaggaggccctcgacctgcggcgcgacgaggtg
ctcgggcgcgtcttctgggaggcggttcccggcgcgctcgcgagtcccttcggggagcac
ctgcgctgggccatggaggagcgcacgcggctgaccttcgaggagcggtccccggcccgc
cccgaccgctacgtcgaggcccggatcgcgccgacgcgggagggcggcctcgccgcctcc
ttctccgacatcaccgagcgcaagctcgccgagcgccaccgcgagcttctggtcaacgaa
ctgaaccaccgggtcaagaacacgctggccgtggtccagtcgatcgccgtccagtcgttc
aagggcgatcatggcccgagcgacgcgcgcgaagccttccagggccgcttgttggcgctg
tcggacgcgcacagcctcctgacgcaggagagctgggaagcagcgcccctcgcgcggatc
gtcgagaacgccctccggccgttccgcgacggccatcgcttcgacatggacgggccgacc
atccgcgtcgggcccaaggccgcggtgagcctcgcgctcgccttccacgagctctgcacg
aacgcggccaaatacggcgccctgtccgtgcccgaggggcgcgtgaacatcgcatggagc
ctggagggtggcgagacgggctcgatgttccgcctccgctgggcggagagcggcggcccc
gcggtgcgcgcgccgacccgctcgggcttcggctcgcgcctcgtcgagcggggactggcg
gccgagctcggcggcacggtcgagctgcgctatccggccggcggcgtcgtttgcgagatc
cttgcccccctcgccagcgtcgaggggcgctga
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