Antarcticirhabdus aurantiaca: OXU80_25330
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Entry
OXU80_25330 CDS
T09604
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OXU80_25330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_25330
Transporters [BR:
jav02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OXU80_25330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
nSTAND3
SMC_N
AAA_22
AAA_16
ORC-CDC6-like
nSTAND1
AAA_30
AAA_29
nSTAND_NTPase5
AAA_23
NACHT
cobW
AAA_28
AAA_19
RsgA_GTPase
AAA
Mg_chelatase
RecA_N
ATPase_2
AAA_14
NB-ARC
DLIC
Motif
Other DBs
NCBI-ProteinID:
WAJ31592
LinkDB
All DBs
Position
5237402..5238547
Genome browser
AA seq
381 aa
AA seq
DB search
MAADSSAPDRAAAPVVPAVSVRDVAMVFSGQAAVADASFDLASGRFLTILGPSGSGKTTL
LRMIAGFQRPTRGEIAINGRPVSAVPPHKRRVGMVFQKLALFPHMTAAENVAFPLKMRRF
DAREIPARVARYLDLVHLGPYADRRIHELSGGQQQRVAIARALVFEPDLLLLDEPLAALD
RKLREEMQLEFRRIQKELCITTINVTHDQREALVVSDEVIVMDRGRIQQMADPISAYREP
ANAFVASFIGVTNRIEGRLSDAQGDAVTLDTPFGPCAGRWGAPAGRSPRVGEAATGMLRA
EQIRVAPSGEDRGGLDASVSAEIVDVIFEGERVVYEARLAGRPEATLRVFDHDPLGHAVQ
PVGATVRLGWNRRDLIVFPND
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgattcttcggcgccggaccgcgcggcggcgcccgttgttccggccgtgtcg
gtgcgcgacgtcgccatggtgttttccggccaggccgccgtcgcggacgcgtccttcgac
ctggccagcggccggttcctgacgatcctcgggccatcgggttcgggcaagacgacgctg
cttcgcatgatcgccggcttccagcggccgacgcgcggcgagatcgccatcaacgggcgc
ccggtctcggcggtgccgccgcacaagcggcgcgtcggcatggtgttccagaagctcgcc
ctcttcccgcacatgacggcggcggagaacgtcgcctttccgctgaagatgcgccgcttc
gacgcgcgcgagatcccggcccgcgtcgcgcgctatctcgacctcgtccatctcggcccc
tatgccgaccggcgcatccacgagctgtccggcggccagcagcagcgcgtggcgatcgcg
cgggcgctggtcttcgagcccgaccttctcctcctcgacgagccgctggccgcgctcgac
cgcaagctgcgcgaggaaatgcagctggagttccgccgcatccagaaggagctctgcatc
accacgatcaacgtcacgcacgaccagcgcgaggcgctcgtcgtgtcggacgaggtgatc
gtgatggatcgcgggcgcatccagcagatggccgatccgatctcggcctatcgcgagccg
gccaacgccttcgtcgcgagcttcatcggcgtcaccaaccggatcgagggacgcttgtcg
gatgcgcagggcgacgcggtgacgctcgacacccctttcggcccctgcgcgggccggtgg
ggcgcgccggccggccgttccccgcgcgtcggcgaggccgcgaccggcatgctgcgcgcc
gagcagatccgcgtcgcgccgagcggcgaggatcggggcggactcgacgcgagcgtctcc
gccgagatcgtcgacgtcatcttcgagggcgagcgggtggtctacgaggcgcggctcgcc
ggccgcccggaggcgaccctgcgcgtcttcgaccacgacccgctcggtcatgccgtccag
cccgtcggcgccaccgtgcgcctcggctggaatcgccgcgacctcatcgtctttccgaac
gattga
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