Antarcticirhabdus aurantiaca: OXU80_25340
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Entry
OXU80_25340 CDS
T09604
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OXU80_25340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_25340
Transporters [BR:
jav02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OXU80_25340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WAJ28107
LinkDB
All DBs
Position
5239834..5240784
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AA seq
316 aa
AA seq
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MPLRPSRSAYPLSWRVLDALEAGARGVWPARFARGVPWLMLAPAILLVGLLAVSLFEIAD
ASLRTLDTATFLPSEEHTLANYARAFSEPVVLAVGLRSLGGALLVTLATLILAFPYAYAM
VRTPSAAWRKTLLIALFLPFFIGQVVRAYGWLILLGNQGLANEILGLAGLGPYRLLFNYW
AVLFGLVQYMLPFAVLMLAPALSAIPEEVEAAAGSLGANWGRTLLHVVFPMAKPGFVGAG
LVVLTLTLTDFAIPAILGGGGQDFIANAIYDQFFRTSDQGMGATLTVLLVLVGSTLVGLV
FALFGAGTLSLRGRGP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcgcccctcccgctccgcctaccccctgtcctggcgcgtcctcgacgcgctg
gaggcgggggcgcgcggcgtctggccggcgcgcttcgcccgcggcgtgccctggctcatg
ctggcgccggcgatccttctcgtcgggctccttgccgtcagcctgttcgagatcgccgat
gcgagcctgcgcacgctcgacacggcgacgttcctgccctccgaggagcacacgctcgcc
aactacgccagggccttctccgagccggtcgtgctggcggtgggtctgcgcagcctcggc
ggcgcgctgctcgtgacgctcgcgacgctgatcctcgccttcccttatgcctatgccatg
gtgcgcacaccgtcggccgcctggcgcaagacgctcctgatcgcgctcttcctgcccttc
ttcatcgggcaggtcgtgcgcgcctacggctggctgatccttctcggcaatcagggtctc
gccaacgagatcctcggcctcgccggcctcgggccctatcgcctcctcttcaactactgg
gcggtgctgttcggcctcgtgcagtacatgctgcccttcgccgtcctcatgctcgcgccc
gcgctctccgccattcccgaagaggtggaggcggcggccgggtcgctcggcgccaactgg
ggccgcacgctcctccacgtcgtctttcccatggccaagcccggcttcgtcggcgcgggg
ctcgtggtgctgacgctgacgctgaccgacttcgccattcccgccatcctcggcggcggc
gggcaggacttcatcgccaacgccatctacgaccagttcttccgcacctccgaccagggc
atgggcgcgacgctgaccgtgctgctcgttctcgtcggctcgacgctggtcggcctcgtc
ttcgcgctcttcggcgcggggacgctttcgctgcgcgggcgcggcccatga
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