Antarcticirhabdus aurantiaca: OXU80_27650
Help
Entry
OXU80_27650 CDS
T09604
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav03030
DNA replication
jav03410
Base excision repair
jav03420
Nucleotide excision repair
jav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OXU80_27650 (polA)
03410 Base excision repair
OXU80_27650 (polA)
03420 Nucleotide excision repair
OXU80_27650 (polA)
03440 Homologous recombination
OXU80_27650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jav03032
]
OXU80_27650 (polA)
03400 DNA repair and recombination proteins [BR:
jav03400
]
OXU80_27650 (polA)
Enzymes [BR:
jav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OXU80_27650 (polA)
DNA replication proteins [BR:
jav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OXU80_27650 (polA)
DNA repair and recombination proteins [BR:
jav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OXU80_27650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OXU80_27650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
Taq-exonuc
HHH
HHH_2
IMS_HHH
DprA_N
Motif
Other DBs
NCBI-ProteinID:
WAJ28532
LinkDB
All DBs
Position
complement(5730449..5733382)
Genome browser
AA seq
977 aa
AA seq
DB search
MKQGDHLFLVDGSAYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLVEESRDTSVGVA
PTHFAVIFDHSSTTFRNALYDGYKAHRPAPPEDLRPQFALIRDAVRAFDLPCIEKQGFEA
DDLIATYARLAVEAGGDVTIVSSDKDLMQLVGPKVTLYDQMKDKRLGPDAVFEKFGVYPE
KMIDLQALVGDTSDNVPGVPGIGPKTAAQLLEEFGTLEALLERAGEIKQQKRRDSLVSFA
DQARLSKQLVTLDANTPLDVALDDLFIHEPDGEKLVAFLKAMEFTTLTKRVAAKLGTDVA
EVGTAKLSVDRQARGPDLDPQAPASPPAPSGDSALPFTPEALAAGRREAAAAETIDRSAY
ETIRDAATLKRWMAEAVEAGLMAFDTETASLSAMNGALVGVSFALASGRAAYVPLGHVAP
PEAADLLAEPGAAEKAVGAQIPMNEALAILKSVLEDPSVLKIAQNAKYDYLVMLRQGIAV
APLDDTMLISYALDASSSLEGHGMDELSERFLGHKPISFKELCGSGKSMRSIATVPIDKV
TEYAAEDADVTLRLWRVLKPRLPADGLAHVYERLERPLVPVLARMEERGIKVDRQILSRL
SGRFAQKLGEIEADIQAITGEGFNPGSPKQLGDMLFGKLGLPGGKKTKTGQWSTDVKVLE
ELAADGHELPRRIVDWRQLTKLKNTYTDALVTHMDEAGRIHTSFSMASTTTGRLSSTEPN
LQNIPVRTEEGRAIRSAFIADEGRVLLSADYSQIELRLLAHMARIPQLVEAFQAGTDIHA
MTASEMFGVPVQGMPADVRRRAKAINFGIIYGISAFGLAAQLAIPREEAGLYIKRYFERF
PGIRDYMDETKAFAKANGYVSTLFGRRAHYPDIRHSNPQVRAFNERAAINAPIQGTAADI
IRRAMIRMEPALAKSKLSARMLLQVHDELVFEVEADEVDETKALVASVMEAAAGPDLDLA
VPLVVEAKAAGNWEEAH
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagggcgaccatctctttctcgtcgacggctcggcctacatcttccgggcctac
cacgcgcttccccccctcacccgcaagtccgacggactgccggtcggggcggtgtcgggt
ttctgcaacatgctgtggaagctcgtggaggaatcgcgcgacacctccgtcggcgtcgcg
ccgacgcacttcgcggtgatcttcgaccattcctcgacgaccttccgcaacgcgctctac
gacggctacaaggcgcaccgcccggcgccgccggaggatctgcgcccccagttcgcgctg
atccgcgacgcggtgcgcgccttcgacctgccctgcatcgagaagcagggcttcgaggcc
gacgacctcatcgcgacctatgcccgcctcgcggtggaagcgggcggcgacgtcaccatc
gtgtcctccgacaaggacctgatgcagctcgtcgggccgaaggttacgctctacgaccag
atgaaggacaagcgcctcggccccgatgccgtgttcgagaagttcggcgtctaccccgag
aagatgatcgacctccaggcgctcgtcggcgacacctccgacaacgtccccggcgttccc
ggcatcggcccgaagacggcggcgcagctcctggaggagttcggcacgctcgaagcgctc
ctggagcgcgcgggcgagatcaagcagcagaagcggcgcgacagcctcgtgtccttcgcc
gaccaggcgcggctgtcgaagcagctggtgacgctcgacgccaacacgccgctcgacgtc
gcgctcgacgacctcttcatccacgagccggacggggagaagctcgtcgccttcctgaag
gcgatggagttcacgacgctgacgaagcgcgtggcggccaagctcggcacggacgtcgcc
gaagtcggcacggccaagctgtccgtcgaccgtcaggcacgcggacccgacctcgacccg
caggcgcccgcgtctccgcccgcaccgtccggcgacagcgctctgcccttcacgccggag
gcgctggccgccggtcggcgcgaggcggcggctgccgagacgatcgaccgctcggcctac
gagacgatccgcgacgccgcgacgctgaagcgctggatggcggaggccgtggaggccggc
ctcatggccttcgacaccgagaccgcctcgctctcggcgatgaacggcgcgctcgtcggc
gtctccttcgcgctggcgtcgggccgggccgcctacgtgccgctcggccacgtcgcgccg
ccggaagcggccgacctcctcgccgagcccggcgcggccgagaaggcggtcggcgcgcag
atcccgatgaacgaggccctcgccatcctcaaatccgtcctcgaggacccctccgtcctc
aagatcgcgcagaacgccaagtacgactacctcgtgatgctccgccaggggatcgccgtc
gcgccgctcgacgacacgatgctgatctcctacgccctcgacgcctcgtcctcgctcgaa
gggcacggcatggacgaactctccgagcgcttcctcggccacaagccgatctccttcaag
gagctctgcggctcgggcaaatccatgcgctccatcgcaactgtccccatcgacaaggtg
acggaatacgccgccgaggacgccgacgtgacgctgcggctctggcgcgtcctcaagccc
cgcctgcccgccgacggcctcgcccacgtctacgagcgcctggagcgcccgctggtgccg
gttctcgcccgcatggaggagcgcggcatcaaggttgaccggcagatcctgtcgcgcctg
tcgggccgcttcgcccagaagctcggggagatcgaggcggacatccaggccatcaccggc
gagggcttcaatcccggcagccccaagcagctcggcgacatgctgttcggcaagctcggc
ctgcccggcggcaagaagaccaagaccgggcaatggtcgaccgacgtgaaggtgctggag
gaactggccgcggacggccacgagctgccgcgccgcatcgtcgactggcgccagctcacc
aagctgaagaacacctataccgacgccctcgtcacccacatggacgaggcggggcgcatc
cacacctccttctccatggcctcgacgacgacggggcgcctgtcctccaccgagccgaac
ctccagaacatccccgtgaggacggaggaagggcgcgccatccgctcggccttcatcgcg
gacgaggggcgcgtgctcctctcggccgactacagccagatcgagctgcggctgctcgcc
cacatggcgaggatcccgcagctggtggaggccttccaggcgggcaccgacatccacgcg
atgacggcctccgagatgttcggcgtgcccgtccagggcatgccggcggacgtgcgccgg
cgcgccaaggccatcaacttcggcatcatctacggcatctcggccttcggcctcgccgcc
cagctcgccatcccgcgcgaagaggccgggctctacatcaagcgctacttcgagcgcttc
cccggcatccgcgactacatggacgagaccaaggccttcgcgaaggccaacggctacgtc
tcgacgctgttcgggcgccgggcgcactatcccgacatccgccattccaacccccaggtg
cgcgccttcaacgagcgcgccgcgatcaacgccccgatccagggcaccgccgccgacatc
atccgccgtgccatgatccgcatggagcccgcgctcgccaagtccaagctctcggcccgc
atgctcctccaggtccacgacgagctggtcttcgaggtcgaggcggacgaggtggatgag
accaaggccctcgtcgcctccgtcatggaggcggccgccggcccagacctcgacctcgcc
gtgccgctggtcgtcgaggcaaaggccgcggggaactgggaagaggcgcattga
DBGET
integrated database retrieval system
