Antarcticirhabdus aurantiaca: OXU80_28460
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Entry
OXU80_28460 CDS
T09604
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
jav
Antarcticirhabdus aurantiaca
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
TraI_hel_assoc_N
SH3_13
UvrD_C_2
AAA_11
AAA_22
AAA_16
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
WAJ31641
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Position
unnamed1:663..4280
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AA seq
1205 aa
AA seq
DB search
MAIYHFSMKPVSRAKGRSAVASIAYRSGEKLTNERDGITHDYTAKQGVEHAEIVLPEGVN
ADWARDRSDLWNAAEFAEKRKDARVAREFEVALPHELSAEQRLEAAREMAQELADRYGAA
VDFAIHAPHEASDVRNHHAHILMTTRQVTENGLGEKTYLERENKWLLANDLPTTDMQLRD
LRQRWEGIANERLAMAGLDIRIDHRSHMERGLEIAPTEHVGVHASQMERRGLDVSRSRLD
EDAARRNAELIREKPEQVLTLITGEKSVFDRHDVARALHRYINDDPQEFQSAFAKVMASP
ALVELQPERAHVVGDPAATGEIELARYSTREMVELESGMIESAQRMHGAHGHGVDRRHVE
RAIERQDAAIQRSAGDASARLSDEQRRAIEHITGPERIAAVVGYAGAGKSTMLAASREAW
EAEGYQVHGAALSGKAAEGLEESSGIQSRTLASWSRGWENDRGTIGRGDVFVIDEAGMVG
SRQLARFVGEAEARGAKIVLVGDHEQLQAIGAGAPFRAITEEIGHAELSEIRRQRVDWQR
EASVDFATHRTAEGLAAYRDHGAISFAENGEDARGQIVRDYLADRDERPEGTRVAMAHRR
ADVRAINDAIRGELQDRGELAQGEDAGALTFQTNDGKREFAPGDRIVFLENNRDLGVKNG
MLGTVEHVEAGRIVAQLDGRGGDSVSVPMGDYQAIDHGYATTIHKNQGATVDRAYVMASG
TMDRHLTYVAMTRHRDGVQLYAAQDEFTNAGRLVEHGAAPYEHDPQKSDSYFVTLETDQG
QQRTLWGVDLERAMKEAAPEIGEKIGLQHEGSTPVTLPDGTQTHRNTWKVQDAGELAYSQ
LERRLSRSGVKETTLDYTRDFAERRGIAEQMGVRSEIEIPAERAGLRAERESTAGDHALD
RRSSQKVRADLAQDLRADPREDLAADRQQRQRPFEGLKLGRGAATESREPDRAGEDGSQI
DQKRPQQAEKQRRGMFAGLKLNARPAPSQERTERPEREGSLRQAPAPDRLAERARRQSPL
EQAVDRYARAYQSVAEHRREGLPVLDMQRQEMRDAGQQLDQVQGGMKDLLRSTLQNDPAT
ARAMTELSGRERVAHVIDGMKRENAALQDPNIRAERFVERWQELQGQRRELRGWQHDDAR
AKVESQMNGMTKSLERDPQVDSILRNRRQELGIGQQQRRGQSIAHELQEEMSRSRQISRG
IGLGR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttggcgatctaccatttcagcatgaagccggtttcgcgggcgaagggccgcagcgccgtt
gcgtcgatcgcctatcgttccggcgagaagctgaccaacgagcgcgacgggatcacgcac
gactacacggcaaagcagggcgtggaacatgcggagatcgtcttgccggaaggcgtgaac
gccgattgggcgcgggatcggtcggacttgtggaacgccgccgagtttgccgagaagagg
aaagacgcccgcgtggcgcgggagttcgaggttgccttgccgcatgagctttcggccgaa
cagcggctagaggcggcgcgggagatggcgcaagagctggccgaccgctacggcgcggcc
gtggacttcgccattcatgcgccgcacgaggcgagcgacgttcgcaatcaccatgcccac
attcttatgaccacgcggcaggtgacggagaacgggctaggcgaaaagacctatctagag
cgcgaaaacaaatggcttctggcgaacgacctgccgacgaccgacatgcagcttcgtgac
cttcgccagaggtgggaggggatcgccaacgagcgccttgcgatggccgggcttgatatt
cggatcgaccatcgttcgcacatggagcgcgggctagagattgcgccgaccgagcatgtg
ggcgtccatgcctcgcagatggagcggcgcggcctcgacgtgtcgcggtcgcggctggac
gaggatgcggcccggcgcaatgccgagctgatccgggagaagcccgagcaggttctaacc
ctcatcaccggcgaaaagagcgtgttcgatcgccacgacgttgcgcgggcgctgcatcgc
tacatcaacgacgacccgcaggagttccagagcgcgtttgcgaaggtgatggcctcgccg
gcgctggtcgagttgcagcccgagcgcgcccacgtagtgggggacccggcagcaacgggc
gagatcgagcttgcccgctattcgacccgcgaaatggtcgagctcgaatccggcatgatc
gagagcgcgcagcggatgcacggcgcgcatggtcatggcgtcgatcgccggcatgtcgag
cgcgccatagagcggcaggacgccgccattcagcgcagcgccggcgatgcttccgcccgg
ctgtccgacgagcagcgccgggcgatcgagcatatcaccggcccggagaggatcgcggcc
gttgtcggttatgccggcgctggcaagtccaccatgctcgcggcctcgcgcgaggcgtgg
gaggccgagggctatcaggtccacggcgcggccctgtcgggcaaggcggccgagggcttg
gaggaaagttccggcatccagagccgcaccctcgcgtcatggtcccgcggttgggagaac
gaccgcggcacgatcggccgcggcgacgtcttcgtgatcgacgaggcgggcatggtcggc
tcgcgccagctcgcccgcttcgttggcgaggccgaggcgcgcggggcgaagatcgtgctt
gtaggcgatcacgagcagctacaggcgatcggggccggcgcaccgttccgggcgatcacg
gaggaaatcggccatgccgagctttccgagattcgccggcagcgggtggactggcagcgg
gaggcgtcggttgacttcgccacgcaccggacggccgaggggctggcggcctatcgcgac
catggcgctatcagttttgccgagaacggcgaggacgcgcgcggccagatcgtgcgcgat
taccttgccgaccgcgacgagcggccggaaggaacccgcgtagcgatggcgcatcgccgg
gccgatgttcgggccatcaacgacgcgatccggggcgagctacaggaccggggcgagctg
gcgcagggcgaggacgccggcgcgctgaccttccagaccaatgacggaaagcgggagttc
gcccccggcgaccgcatcgtgttcttggagaacaaccgcgaccttggcgtgaaaaacggg
atgctaggcaccgtcgagcatgtcgaggccggccggatcgtcgcgcagctcgacggccgg
ggcggcgatagcgtttccgtgccgatgggcgactatcaggcgatcgaccacggctatgcg
acgacgattcacaaaaatcagggcgcaaccgtggaccgcgcctatgtgatggcgtcgggg
acgatggaccggcatctaacctatgtcgccatgacccggcatcgtgacggggtgcagctc
tacgcggcacaggacgagttcaccaatgccggccggctggtcgagcatggggccgcgccc
tatgagcatgacccgcagaaatccgacagctatttcgtgacgctggaaactgaccaaggg
cagcagcgcaccctatggggcgtcgatcttgagcgcgccatgaaggaggccgcgccggag
atcggggagaagatcggcctacagcatgagggttccacccccgtcaccttgcccgatggg
acgcagacgcaccggaacacatggaaggttcaggacgccggcgagctggcctatagccag
ctagaacgccgcctgtcccggtcgggcgtgaaggaaacgacgctcgactatacccgcgac
tttgccgagcggcgcgggatcgcggagcaaatgggcgtccgcagcgagatcgagattccg
gccgagcgcgccgggctacgtgcggaacgggagtcgacggccggggatcatgcccttgat
cggagatcctcgcaaaaagtccgcgcggatctcgcgcaggatcttcgtgcagatcctcgc
gaggatctcgccgccgatcgacagcagcgccaacggccattcgagggcctgaaactcggg
cgcggcgcggcgaccgagagccgcgagccagaccgcgccggcgaggacggctcgcagatc
gaccagaaacggccgcaacaggccgagaagcagcggcgcggtatgttcgccggcctcaag
ctcaatgcgcgtcctgcaccctcacaggagcgcacagagcggccggaaagagaggggagc
ttgcggcaggcgccggcgcctgaccggttggccgagcgggcgcggcggcagtcgccgctt
gagcaggctgttgaccgctatgcgcgggcctatcagtcggtcgcggagcatcggcgcgag
ggtttgccggtcctcgacatgcagcggcaggaaatgcgcgatgccggccagcagctcgac
caggtgcagggcggcatgaaagatttgctgcgctcgacgttgcaaaacgacccggcgacg
gcacgcgccatgaccgagctttccggccgggagcgtgtcgcgcatgtcatcgacggaatg
aagcgcgaaaacgccgcgctgcaagacccgaatatcagggccgagcggttcgttgaacgc
tggcaggagctacagggccagcgccgggagcttcgcggctggcagcacgacgacgcccgc
gccaaggtcgaaagccagatgaacggtatgaccaagagccttgagcgtgacccgcaggta
gattccatcctgcgcaatcgccggcaggaactcggaatcgggcagcagcagcgccggggg
cagagcatcgcccacgagctgcaagaggaaatgtcacgcagccggcagattagccggggc
atcggtttgggaaggtag
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