Janibacter sp. YB324: H7A72_03665
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Entry
H7A72_03665 CDS
T08461
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jay
Janibacter sp. YB324
Pathway
jay03420
Nucleotide excision repair
jay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H7A72_03665
03430 Mismatch repair
H7A72_03665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jay03400
]
H7A72_03665
Enzymes [BR:
jay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7A72_03665
DNA repair and recombination proteins [BR:
jay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H7A72_03665
MMR (mismatch excision repair)
Other MMR factors
H7A72_03665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QNF94902
LinkDB
All DBs
Position
731695..734997
Genome browser
AA seq
1100 aa
AA seq
DB search
MSHPPRISAVDLARALGQEHPPTDEQREIIEAPLEPLLVVAGAGSGKTETMTARVVWLVA
NDLVTPEQVLGLTFTRKAAGELAERVGRRLATLESAGVWSPPQEPDADGLGGTPTISTYH
AYAGRLVREGALRLGYEKDSRLLSEAATWQLAHEVVVAWDGPMADIDKTESTVTNAVVSL
AGELAEHLRSPAEVDDFARRTLAHLEGVAAAGKDFTKDFRGKVMTPMAQQRLVLPIVERY
REVKRERSVMDFSDQMALAAALATRFPDLGQAERDRFRVVLLDEFQDTSEAQLVLMRELF
APAGQAPAAVTAVGDPHQSIYAWRGASATTLATFPRSFATAGEAAPVKHLSTSWRNDESI
LAVANAVAGPLGAVSGVPVTPLRPRPGAGQGQVQALRVETAHDEAAQVAEWIATRRGDGR
RTAAVLCRKRSQFTLVAEALAARNIPHEVVGLGGLLLTPEVADVISLLTVVQDPSRGDRL
MRLLTGPPGLLGPADLDGLGTWARHLAREARAELGDDAPPPGPDDTVTIVDALDRLPEPG
WIGDGGQTISGSALRRLQHIGAMVARLRRQAGVPLPDLVGEAERELGVDVEVLARPGWSP
GAARAHLDAFADVAAQFASSADRPTLGGFIDWIEAAVEQERGLEKPVVEPTKDAVQILTC
HAAKGLEWDVVAVPGLAEGVFPTHLSRASLKDGQWVVGQVNDSGWITGLDGVPFPLRGDR
EGLPQLDLSLAETKPLQEELGRYRADNGEHGLLEERRLAYVAFTRARSQLLLGSWVWGAT
GQQPRLQSRFLDEALAAGPVEVLGWADMPETKEATNPALEVGRQVVWPGGEPAPERPVLE
AAAAAMAARAGTAGGDGAAGAVAADGAGGGGDAGAEPDEIDATMRLLLREREQRRRARDE
DVEVELPAHLSTSQLVSLARDAGAFALDLRRPMPQPPQVAGRRGTAFHAWVEQHYADAGL
VDLLEMPGSADESLGDADLATMQEHFLASEWAERVPLEVELSLETVIGEHAVRGRVDAVF
ADDDGGVTVVDWKTGRPPRGDEAQVRAVQLSAYRIAYARWRGLDPARVRGAFFHAATGET
TRPRLLDEDEVVRLLGEVVA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgccccgcatctccgccgtcgacctggcccgtgccctcggtcaggagcac
ccgccgaccgacgagcagcgcgagatcatcgaggcaccgctcgagccgctgctcgtcgtc
gccggcgccggctcgggcaagaccgagacgatgaccgcgcgcgtcgtgtggctcgtggcc
aacgacctcgtcacccccgagcaggtcctcggtctgaccttcacccgcaaggcggccggc
gagctcgccgagcgggtcgggcgacgtctggcgacgctcgagtcggcgggggtctggtcg
ccgccgcaggagcccgacgccgacggactcggtggcaccccgacgatctcgacctaccac
gcctacgccggtcgcctcgtccgtgagggcgccctgcgcctgggctacgaaaaggacagc
cgcctgctctccgaggccgccacctggcagctcgcgcacgaggtcgtcgtcgcctgggac
gggccgatggccgacatcgacaagaccgagtcgacggtgaccaatgccgtcgtctcgctc
gcgggcgagctggccgagcacctgcgctcgccggccgaggtcgacgacttcgcccggcgg
accctcgcgcacctcgagggcgtggccgccgcgggcaaggacttcaccaaggacttccgc
ggcaaggtcatgacgcccatggcgcagcagcgtctcgtgctgccgatcgtcgagcgctac
cgcgaggtcaagcgggagcggtcggtcatggacttctccgaccagatggcgctcgcggcc
gccctggcgacgcgcttccccgacctcgggcaggccgagcgcgaccgcttccgggtcgtg
ctgctcgacgagttccaggacacctccgaggcgcagctggtcctcatgcgcgagctcttc
gcccccgccgggcaggccccggccgcggtcacggccgtcggcgacccgcaccagtcgatc
tacgcctggcgcggggcgagcgcgacgacgctggcgaccttcccgcggtccttcgccacc
gcaggggaggccgcccccgtcaagcacctgtcgacgagctggcgcaacgacgagtcgatc
ctcgccgtcgccaatgccgtggccgggccgctgggcgccgtgagcggtgtgccggtgacc
ccccttcgtcctcgccccggggccggccaggggcaggtgcaggcgctgcgggtcgagacc
gcccacgacgaggcggcgcaggtcgccgagtggatcgcgacccggcgcggagacggtcgg
cgcacggcggcggtgctgtgccgcaagcgcagccagttcaccctcgtggccgaggcgctc
gcggcacgcaacatcccgcacgaggtcgtggggctcggcgggctgctgctcacgcccgag
gtcgccgacgtcatctcgctgctcacggtcgtgcaggacccctcgcgcggcgaccggctc
atgcggctgctcaccgggccgccggggctcctcgggccggccgacctcgacggtctcggc
acctgggcgcgacacctcgcgcgcgaggcgcgggccgagctcggcgacgacgcaccccca
cccgggcccgacgacacggtgacgatcgtcgacgcgctcgaccggctgcccgagcccggg
tggatcggggacggcgggcagacgatcagcggcagcgccctgcgccggctgcagcacatc
ggggcgatggtcgcgcggctgcgacggcaggccggcgtgcccctgcccgacctcgtcggg
gaggccgagcgggagctcggggtcgacgtcgaggtgctcgcgcgccccggctggtccccg
ggagccgcgcgggcgcacctcgacgccttcgccgacgtggcggcgcagttcgcctcgagc
gccgaccgtccgacgctcggcgggttcatcgactggatcgaggcggcggtcgagcaggag
cgcgggctggagaagccggtcgtcgagccgaccaaggacgccgtgcaaatcctcacctgc
cacgcggcgaaggggctggagtgggacgtcgtcgccgtgccggggctggcggagggcgtc
ttcccgacgcacctgtcacgagcttcgctcaaggacgggcagtgggtcgtcgggcaggtc
aacgactcggggtggatcaccgggctcgacggggtccccttcccgctgcgcggcgaccgc
gaaggcctgccgcagctcgacctgtccctggccgagaccaagcctctgcaggaggagctg
gggcgctaccgggccgacaacggcgagcacgggctcctcgaggagcggcggctggcctat
gtcgccttcacccgcgcacgcagccagctgctccttggctcgtgggtctggggggcgacg
gggcagcagccgcggctgcagtcacgcttcctcgacgaggcgctcgcggccgggccggtc
gaggtgctcggctgggcggacatgcccgagaccaaagaggcgaccaaccccgccctcgag
gtcggccggcaggtggtctggcccggcggtgagccggcgccggagcgccctgtgctggag
gccgcggcggcggcgatggccgcgcgtgccgggacggctggcggtgacggggcggcgggc
gccgtggcggctgacggtgccgggggaggcggcgacgccggtgccgagcccgacgagatc
gacgcgacgatgcggctgctcctgcgggagcgggagcagcgccgtcgcgcccgagacgag
gacgtcgaggtcgagctgcccgcgcacctgtcgacctcgcagctcgtctcgctggcgcgt
gacgccggggccttcgccctcgacctgcgacgcccgatgccgcagccgccgcaggtggcc
gggcggcggggcacggccttccacgcgtgggtcgagcagcactacgccgacgcggggctg
gtcgacctgctcgagatgcccggcagcgccgacgaatcgctcggtgacgccgacctggcc
acgatgcaggagcacttcctggcgagcgagtgggccgagcgggtgcccctcgaggtcgag
ctctccctcgagaccgtcatcggggagcacgccgtgcgcggccgcgtcgacgcggtcttc
gccgacgacgacggtggcgtgaccgtcgtcgactggaagaccggccgcccgccccggggc
gacgaggcgcaggtccgcgcggtccagctgtcggcctaccggatcgcctacgcgcggtgg
cgcgggctcgaccccgcccgcgtccggggggccttcttccacgccgcgaccggcgagacc
acccgccctcgcctgctcgacgaggacgaggtcgtgcggctcctcggggaggtcgtcgcc
tga
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