Janibacter sp. YB324: H7A72_04515
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Entry
H7A72_04515 CDS
T08461
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jay
Janibacter sp. YB324
Pathway
jay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7A72_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jay03019
]
H7A72_04515
03009 Ribosome biogenesis [BR:
jay03009
]
H7A72_04515
Enzymes [BR:
jay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H7A72_04515
Messenger RNA biogenesis [BR:
jay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H7A72_04515
Ribosome biogenesis [BR:
jay03009
]
Prokaryotic type
rRNA helicases
H7A72_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
adh_short
UvrA_inter
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QNF95054
LinkDB
All DBs
Position
917953..919764
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AA seq
603 aa
AA seq
DB search
MSTESTTPDAPETSETTEPEGPTFADLGLDDRVVRSLRDIGYERPSPIQAATIPALLEGR
HVVGLAQTGTGKTAAFALPVLSRLDPKQKAPQALILAPTRELALQVCEAIEKYSARMPGV
RVLPVYGGQGYGVQLSALRRGVHIVVGTPGRIMDHLDKGTLDLSQLRFLVLDEADEMLKM
GFAEDVETILAATPEDKHVALFSATMPAQIRRISQKYLTDALEITVERKTTTAPNITQRH
LFVSYPQKVEALTRILEVENFEAMIVFVRTKNETETLAEKLRARGFSAAAINGDVAQAQR
ERTVSQLKSGKLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGD
AISFVTPRERHLLKAIEKATRTTLTEMSMPSAEDINASRLGRFDDRITSALASPDLSTFR
DVVGHYVREHDVPESDVAAALAIVLQGDEPMLLDPDPVRPPRPERDERGPRRERDEGGRR
SDRGPRGSSGPMASYRIAVGRRHKVEPRQIVGALANEGGLRREDFGHIDIRGDHSIVELP
ATLPEGTADRLQSTRISGQLIELREWQERGGARGGPRRDKPYGKKPYAKKSYDKKPHRKG
RRD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgagagcacgacccctgacgcgcccgagacctccgagacgaccgagccggag
ggcccgaccttcgccgacctcggccttgacgaccgggtcgtgcggtccctgcgggacatc
ggctacgagcggccctcgccgatccaggccgcgaccatcccggcgctgctcgaggggcgc
cacgtcgtgggcctcgcgcagacaggcaccggcaagacggcggccttcgcgctgccggtc
ctcagccggctcgaccccaagcagaaggccccgcaggcgctcatcctcgccccgacccgc
gagctcgcgctgcaggtctgcgaggccatcgagaagtactcggcccgcatgcccggcgtg
cgcgtcctgccggtctacggagggcagggctacggggtgcagctgagcgcgctgcgccgc
ggcgtgcacatcgtcgtcggcacgcccggacgcatcatggaccacctcgacaagggcacg
ctcgacctgtcgcagctgcgcttcctcgtcctcgacgaggcggacgagatgctcaagatg
ggcttcgccgaggacgtcgagacgatcctcgcggcgacgcccgaggacaagcacgtcgcc
ctcttcagcgcgacgatgcccgcgcagatccgccgcatctcccagaagtacctcaccgat
gccctcgagatcaccgtcgagcgcaagacgacgaccgcacccaacatcacccagcggcac
ctcttcgtctcctatccgcagaaggtcgaggcgctcacccggatcctcgaggtggagaac
ttcgaggcgatgatcgtcttcgtccgcaccaagaacgagaccgagaccctcgccgagaag
ctgcgggcgcgcgggttctccgccgccgcgatcaacggcgacgtcgcccaggcccagcgc
gagcggacggtcagccagctcaagtccggcaagctcgacatcctcgtcgcgaccgacgtc
gccgcccgcggcctcgacgtcgagcggatcagccacgtcgtcaactacgacatcccgacc
gacaccgagtcctacgtccaccggatcgggcgcaccggccgcgccgggcgctctggtgac
gcgatctccttcgtcacgccccgcgagcggcacctgctcaaggcgatcgagaaggccacc
cgcaccacgctcaccgagatgtcgatgccgagcgcggaggacatcaacgccagccggctg
gggcgcttcgacgaccggatcacctcggccctcgcctcgcccgacctgtcgaccttccgt
gacgtcgtcgggcactacgtgcgcgagcacgacgtgccggagagtgacgtcgcggccgcg
ctggcgatcgtcctccaaggggacgagccgatgctcctcgaccccgacccggtgcgtccg
ccgcgtccggagcgggacgagcgcggaccacgtcgggagcgggacgaagggggacgccgc
agtgaccgtgggccgcgcggctcctcgggccccatggcctcgtaccggatcgcggtcggt
cgccggcacaaggtcgagccgcggcagatcgtcggcgccctggccaacgaagggggcctg
cgtcgcgaggacttcggccacatcgacatccgcggcgaccactcgatcgtcgagctgccc
gcgaccctgcccgagggcacggccgaccggctgcagagcacccggatctcggggcagctc
atcgagctgcgcgagtggcaggagcgcggtggcgctcgtggcgggccgcgccgtgacaag
ccctacggcaagaagccctacgcgaagaagtcctacgacaagaagccgcaccgcaagggc
cgtcgggactga
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