Janibacter sp. YB324: H7A72_05410
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Entry
H7A72_05410 CDS
T08461
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jay
Janibacter sp. YB324
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jay03016
]
H7A72_05410 (truB)
Enzymes [BR:
jay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H7A72_05410 (truB)
Transfer RNA biogenesis [BR:
jay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H7A72_05410 (truB)
Prokaryotic type
H7A72_05410 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
DUF6011
Motif
Other DBs
NCBI-ProteinID:
QNF95217
LinkDB
All DBs
Position
1104896..1105816
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AA seq
306 aa
AA seq
DB search
MSEGLVVVDKPAGWTSHDVVARGRRLYRTKKVGHAGTLDPMATGVLVLGVGRGTKLLTFL
VGADKTYTATIRLGQATITDDAEGEITDLGEVAGIDRAAIDAAVTRLTGDIEQVPSAVSA
IKIKGQRSYHRVRAGEEVDLPARAVTVSRFDVLDVRPTEADGHPVLDVDVVVEVSSGTYV
RALARDLGADLGSRGHLTALRRTRVGGLTLEHAHTLDELTALRESGGDDAVLPITPLEKA
AAAALTTRALTDDEARALGYGQRIASAEPGRVEPVAALSPTGELVAVLDESRARARAHVV
FAPASS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagggcctggtcgtcgtcgacaagccggctggctggaccagccacgacgtcgtc
gcccgcggccgccggctctaccggaccaagaaggtcggccacgccggcaccctcgacccg
atggccacgggcgtcctcgtcctcggcgtcgggcgggggaccaagctgctcaccttcctc
gtcggcgcggacaagacctacaccgcgacgattcggctcgggcaggcgacgatcaccgac
gacgccgaaggggagatcactgacctcggcgaggtggccggcatcgaccgggctgcgatc
gacgcggccgtcacccggctcaccggcgacatcgagcaggtgcccagtgcggtgagcgcg
atcaagatcaagggccagcgctcctaccaccgcgtccgcgcgggggaggaggtcgacctg
cccgcacgtgcggtgaccgtctcgcgcttcgacgtgctcgacgtgcgcccgaccgaggcc
gacggccacccggtgctcgacgtcgacgtggtcgtcgaggtctcctcgggcacctacgtg
cgggccctcgcccgcgacctcggcgccgacctcggcagccggggtcacctcaccgcgctg
cgccgcacaagggtgggtggcctgacgctcgagcacgcccacaccctcgacgagctcacc
gccctgcgcgagagcggcggcgacgacgcggtgctgcccatcacgccgctcgagaaggcg
gccgcggcggccctgacgactcgggcgctcaccgacgacgaggcccgcgccctgggctac
gggcagcgcatcgccagcgccgagccgggccgggtcgagcccgtcgcggccctgtcgccg
accggcgagctggtcgcggtgctcgacgagagtcgggcccgtgcccgagcccacgtcgtc
ttcgcccccgccagttcgtag
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