Janibacter sp. YB324: H7A72_05455
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Entry
H7A72_05455 CDS
T08461
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
jay
Janibacter sp. YB324
Pathway
jay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7A72_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jay03019
]
H7A72_05455
03009 Ribosome biogenesis [BR:
jay03009
]
H7A72_05455
Enzymes [BR:
jay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
H7A72_05455
Messenger RNA biogenesis [BR:
jay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H7A72_05455
Ribosome biogenesis [BR:
jay03009
]
Prokaryotic type
rRNA processing factors
H7A72_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QNF95225
UniProt:
A0A7G7HW11
LinkDB
All DBs
Position
1116540..1119257
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AA seq
905 aa
AA seq
DB search
MATDNDQPVDESTTEAPAAVPSFGLLFQPPAPAPAPARRPAPEPADEDDESPDEDHDSGS
DSSDDADSGQGEGGRRRRRRGGRGRNNRTGDEGDGDQDGSDDSGDSRDERGADESDDEAR
GSAKSKGGKGRGKSKKSADADESGDDAQASDGADSERDDSSDDDGDSDDEGGGSARRRRR
RRRGGGGGNGGQEDPPGTVTKVRESRRNEPQAIKGSTRLEAKKQRRREGREAGRRRTIIT
EAEFLARRESVERVMVVRQHGDRTQIGVLEDGVLAEHYVSRETTSTLVGNVYLGRVQNVL
PSMEAAFIDIGKGRNAVLYAGEVNWEAQGVGNGQARRIENALSSGDSVLVQVTKDPVGHK
GARLTSQISLPGRYVVYVPEGSMTGISRKLPDTERSRLKGILKQVVPDSAGVIVRTAAEG
ASEAELTADVERLTKAWDKISSTAESKKGKKGSAGGAPVLLHAEPDMTVRVIRDIFNEDF
AKMVVAGDDAWREIKGYVDDVAPDLSDRLERYTGEGDVFAAHRIDEAIAKAMDRKVWLPS
GGSLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVD
FIDMVLESNRDLVVRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGAGLIEVFSQECEH
CHGRGIIVHSEPVAHDPGGHAGGNHGGNGGGGGGKSRRGRSKGDKDTSSQRREPVEEQTD
ANGRTAAQIAAAAHAAAIKNIAGEAGEDDVARLEPTTVVEQSEPVEQSEPEPQQEAPKRR
RGGRRAASSAGAPVALEPVDLSETPAPEPEPEPQPVTAPAPEQAEETPAPTRRRGGRRAA
SSAGAPVALQAVDLTAPAEPTGAPLTKVAGESGEAATTPVADPEPSAPARRKRKRVTSEA
GPPKA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacaacgaccagccggtcgacgagagcacgaccgaagcccccgcagcagtc
ccgagcttcggactgctcttccagccccccgccccggccccggccccggcccgccgaccg
gcccccgagccggcggacgaggacgacgagtcgcccgacgaggaccacgactccggctcc
gactcctccgacgacgccgactccggccagggcgaagggggtcgccgtcgccgccgccgt
ggtggccgcggccgcaacaaccgcaccggcgacgagggcgacggcgaccaggacggctcc
gacgactcgggtgactcccgtgacgagcgaggcgccgacgagtccgacgacgaggcccgg
ggctccgccaagagcaagggcggcaagggccgcggcaagtccaagaagtcggccgatgcg
gacgagtccggcgacgacgcccaggcctccgacggcgccgactccgagcgcgacgactcc
tccgacgacgacggtgactccgacgacgagggcggcggcagcgcccgccggcgtcgccgc
cgtcgccgtggtggcggcgggggcaacggcggtcaggaggacccgcccgggaccgtgacc
aaggtgcgcgagtcgcgccgcaacgagccccaggcgatcaagggctccacccgcctcgag
gcgaagaagcagcgccgccgcgagggccgcgaggccggtcgacgccgcacgatcatcacc
gaggcggagttcctcgcccgtcgcgagagcgtcgagcgggtcatggtcgtgcgccagcac
ggtgaccgcacccagatcggtgtcctcgaggacggcgtgctcgccgagcactacgtctcc
cgcgagacgacctcgaccctcgtcggcaacgtctacctcggccgggtgcaaaatgtgctg
cccagcatggaggccgccttcatcgacatcggcaagggccgcaatgcggtgctctacgcc
ggtgaggtcaactgggaggcccagggcgtcggcaacggccaggcccggcggatcgaaaat
gcgctgtcctccggcgactcggtcctcgtccaggtgaccaaggacccggtgggccacaag
ggtgcgcgcctcacctcgcagatctcgctgcccggccgctacgtcgtctacgtgcccgag
ggcagcatgacgggcatctcgcgcaagctgcccgacaccgagcgctcccgcctcaagggg
atcctcaagcaggtcgtcccggacagcgcgggcgtcatcgtgcgcaccgccgcggagggg
gcctccgaggccgagctgaccgccgacgtcgagcggctcaccaaggcctgggacaagatc
agctccacggccgagtcgaagaagggcaagaagggctctgccggcggcgcgcccgtcctg
ctgcacgccgagccggacatgaccgtccgggtcatccgcgacatcttcaacgaggacttc
gccaagatggtcgtggccggcgacgacgcctggcgcgagatcaagggctacgtcgacgac
gtcgcgcccgacctgtccgaccgtctcgagcgctacacgggtgagggcgacgtcttcgcg
gcgcaccgcatcgacgaggcgatcgccaaggcgatggaccgcaaggtctggctgccctcc
ggcggttcgctcgtcatcgaccgcaccgaggcgatgacggtcgtcgacgtcaacaccggc
aagttcaccgggtccgggggcaacctcgaggagacggtgaccaagaacaacctcgaagcc
gccgaggagatcgtccggcagctgcgactgcgcgacatcggcggcatcatcgtcgtcgac
ttcatcgacatggtcctcgagtccaaccgcgacctcgtcgtccggcgcctcctcgagtgc
ctcggccgtgaccgcaccaagcaccaggtcgccgaggtcacctcgctcggcctggtccag
atgacccgcaagcgggtcggcgcgggcctgatcgaggtcttctcgcaggagtgcgagcac
tgccacggccgcgggatcatcgtccacagcgagcccgtcgcccacgatcccggtggtcac
gccggcggcaaccacggcggcaacggcggcggtggcggcggcaagtcgcgtcgtggccgg
tcgaagggggacaaggacacctcctcgcagcgccgggagccggtcgaggagcagaccgac
gccaacggccgcaccgcggcccagatcgcggcggcggcccacgcggcggcgatcaagaac
atcgccggcgaggccggcgaggacgacgtcgcccggctcgagcccacgacggtggtcgag
cagagcgagccggtcgagcagagcgagccggagccgcagcaggaggcgcccaagcgacgc
cgcggtggccgccgggccgcgtccagcgccggtgcccccgtcgccctcgagcccgtcgac
ctctccgagaccccggcccccgagcccgagcccgagccgcagccggtcacggctcccgcg
ccggagcaggccgaggagacgccggctccgacgcggcgtcgtggcggccgccgagcagcc
tcgagcgccggtgcgccggtggccctgcaggccgtcgacctcaccgccccggccgagccc
acgggcgctccgctgaccaaggtcgcgggggagtccggcgaggctgcgaccacgccggtc
gccgaccccgagccgtccgccccggcccgtcgcaagcgcaagcgcgtgacctccgaggcc
ggcccgcccaaggcctga
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