Janibacter sp. YB324: H7A72_07005
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Entry
H7A72_07005 CDS
T08461
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
jay
Janibacter sp. YB324
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jay03016
]
H7A72_07005
Enzymes [BR:
jay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
H7A72_07005
Transfer RNA biogenesis [BR:
jay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H7A72_07005
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QNF95494
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All DBs
Position
complement(1464323..1465555)
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AA seq
410 aa
AA seq
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MSDEPVTDEAAEAPAPLPVLTEPAEGVPPVITSESELDDCAAAIAAGVGPVALDAERASG
YRYGQSAYLVQVRREGAGTWLIDPVTLPDLTPLDRSIGTGEWILHAATQDLPCLREVGLV
PRQIFDTELAARLLGLPRVGLAAVIEHYLGISLAKEHSAVDWSTRPLPEPWLRYAALDVE
VLGELRNLMGADLASQGKGEWARQEFEALLSWRPASKEDPWRRTSGLHKIRQPRVLATVR
ELWYERDRIARDRDTSPGRVIPDTSLVDIALADPHAPADLPRGHRAIQRSQRAWLDAVAR
ARKLPDAELPPASVKADGPPPQRSWPSRDPLAAERLATTRETLGAFAEAHTVPIENVCSP
DPLRRVVWSPPAERTPAAFAAALADLGVRPWQREIVAPMLADAFAAHPDA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagcccgtcacggacgaggcagcggaggcgcccgctccgctgccggtgctc
accgagcccgccgagggcgtcccgccggtcatcacgagcgagtccgagctcgacgactgc
gcggcggcgatcgccgcgggcgtcggaccggtggcgctcgacgccgagcgtgcgtccgga
tatcgctacgggcagagcgcctacctcgtccaggtacgtcgcgagggcgccgggacctgg
ctcatcgacccggtgaccctgcccgacctgacacctctcgaccggtccatcggcaccggt
gagtggatcctgcacgcggccacccaggacctgccctgcctgcgcgaggtaggtctggtg
ccacggcagatcttcgacaccgagctcgccgcgcgcctgctcgggctcccgcgcgtcggg
ctcgccgccgtcatcgagcactacctcggcatcagcctggccaaggagcactccgcggtc
gactggtcgacccgaccgctgcccgagccgtggctgcgctacgcggcgctcgacgtcgag
gtgctcggcgagctgcgcaacctcatgggcgcggacctggcctcccagggcaagggcgag
tgggcgcgacaggagttcgaggcgctgctgtcctggcgcccggcctccaaggaggacccg
tggcgacgcacctccggcctgcacaagatccgtcagccgcgcgtcctcgccacggtgcgc
gagctctggtacgagcgagaccgcatcgcgcgcgaccgcgacacctcgccgggtcgggtc
atccccgacacctccctcgtcgacatcgccctcgccgacccgcacgcccccgctgacctg
cctcgcggccaccgggcgatccagcgcagtcagcgggcctggctcgacgctgtggcccgg
gcccgcaagctccccgacgccgaactgccgccggcctcggtcaaggccgacggccctccc
ccgcaacgctcctggcccagccgcgacccgctcgccgccgagcggctggccaccacccgc
gagaccctcggcgccttcgccgaggcacacacggtcccgatcgaaaacgtctgctccccc
gacccgctgcgccgggtcgtgtggagcccgccggccgagcgcacccccgcggccttcgcc
gccgccctcgccgacctcggcgtgcgcccctggcagcgcgagatcgtcgccccgatgctc
gccgacgccttcgccgcccaccccgacgcctga
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