KEGG   Janibacter sp. YB324: H7A72_10220
Entry
H7A72_10220       CDS       T08461                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
jay  Janibacter sp. YB324
Pathway
jay03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H7A72_10220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jay03019]
    H7A72_10220
Messenger RNA biogenesis [BR:jay03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H7A72_10220
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QNF93174
LinkDB
Position
complement(2108808..2110493)
AA seq 561 aa
MSHPHPDLELPPPLADGALRVVALGGLGEVGRNMAVVEHQGQLLIIDCGVLFPEDHQPGV
DLILPDFEYILDRLDDVQAIVLTHGHEDHIGAVPYLLKHKPDIPLVGSMLTLALIEAKLK
EHRIKPFTLGVKEGGRESFGVFDCEFIAVNHSIPDALAVFVRTEGGTLLHTGDFKMDQLP
LDRRLTDLRAFARVGEEGVDLFLTDSTNAEVPGFTTPEREIGPAIDTVFRNAQRRIIVAC
FSSHVHRVQQVLDAAERNGRKVAMVGRSMVRNMGIAADLGYLKVPDRVLVDVKKLDNYPD
DEVVLICTGSQGEPMAALSRMANRDHRIDVGDGDTVLLASSLIPGNENAVYRVINGLMRL
GADVVHKGNAKVHVSGHASAGELLYCYNIVKPRNVMPVHGEWRHLVANADLAIQTGVDPD
HVVLAEDGVVVDLVDGRARITGAVPCGYVYVDGSSVGGATEELLKDRRILRDEGFISVMV
VVDSSTGKVIAGPEITARGFAEDDEIFTQVEPKIIAALDEAARKGTTDTHQLQQVVRRAV
GGWVGGKIRRRPMIIPVVVEA
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagccacccgcaccccgacctcgagctgccgccaccgctcgccgacggagccctgcgc
gtcgtcgcgctcggcggtctcggcgaggtcggccgaaacatggccgtcgtcgagcaccag
gggcagctgctcatcatcgactgcggcgtgctcttccccgaggaccatcagccgggcgtc
gacctgatcctgcccgacttcgagtacatcctcgaccggctcgacgacgtgcaggcgatc
gtcctcacccacggccacgaggaccacatcggcgccgtgccctacctgctcaagcacaag
cccgacatcccgctcgtcggctcgatgctcacgctcgccctcatcgaggccaagctcaag
gagcaccggatcaagcccttcaccctcggggtcaaggagggcgggcgcgagagcttcggc
gtcttcgactgcgagttcatcgcggtcaaccactcgatccccgacgcgctggcggtcttc
gtgcgcaccgagggcggcaccctgctgcacacgggcgacttcaagatggaccagctgccg
ctcgaccgtcggctgaccgacctgcgggccttcgcccgggtcggcgaggagggggtcgac
ctcttcctcaccgactcgaccaatgccgaggtccccggcttcaccacccccgagcgcgag
atcgggccggcgatcgacaccgtcttccgcaatgcccagcgtcggatcatcgtcgcctgc
ttctccagccacgtgcaccgcgtccagcaggtcctcgacgccgccgagcgcaatggccgc
aaggtcgcgatggtcggtcgctcgatggtgcgcaacatgggcatcgccgccgacctgggc
tacctcaaggtgcccgaccgggtcctcgtcgacgtcaagaagctcgacaactaccccgac
gacgaggtcgtgctcatctgcacgggcagccagggcgagcccatggccgctctgtcgcgc
atggccaaccgcgaccaccgcatcgacgtcggcgacggcgacacggtgctgctcgcctcg
agcctgatccccggcaacgaaaatgccgtctaccgggtcatcaacggcctcatgcggctg
ggcgccgacgtcgtgcacaagggcaacgccaaggtgcacgtctccggtcacgccagcgcg
ggcgagctgctctattgctacaacatcgtcaagccgcgcaatgtcatgccggtccacggc
gagtggcggcacctcgtcgccaacgccgacctggcgatccagacgggcgtcgaccccgac
cacgtcgtgctggccgaggacggcgtcgtcgtcgatctcgtcgacggtcgcgcgcgcatc
accggggcagtgccctgcggctacgtctacgtcgacggttcgagcgtcgggggtgcgacc
gaggagctgctcaaggaccgtcgcatcctgcgcgacgagggcttcatctccgtcatggtc
gtcgtcgactcctcgaccggcaaggtcatcgccggtccggagatcaccgcccgcggcttc
gccgaggacgacgagatcttcacccaggtcgagcccaagatcatcgcggcgctcgacgag
gcggcccgcaagggcacgaccgacacccaccagctgcagcaggtcgtgcgccgtgccgtc
ggtggctgggtcggcggcaagatccgccgacgcccgatgatcatcccggtggtcgtcgag
gcctga

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