Janibacter sp. YB324: H7A72_10220
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Entry
H7A72_10220 CDS
T08461
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
jay
Janibacter sp. YB324
Pathway
jay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7A72_10220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jay03019
]
H7A72_10220
Messenger RNA biogenesis [BR:
jay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H7A72_10220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QNF93174
LinkDB
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Position
complement(2108808..2110493)
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AA seq
561 aa
AA seq
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MSHPHPDLELPPPLADGALRVVALGGLGEVGRNMAVVEHQGQLLIIDCGVLFPEDHQPGV
DLILPDFEYILDRLDDVQAIVLTHGHEDHIGAVPYLLKHKPDIPLVGSMLTLALIEAKLK
EHRIKPFTLGVKEGGRESFGVFDCEFIAVNHSIPDALAVFVRTEGGTLLHTGDFKMDQLP
LDRRLTDLRAFARVGEEGVDLFLTDSTNAEVPGFTTPEREIGPAIDTVFRNAQRRIIVAC
FSSHVHRVQQVLDAAERNGRKVAMVGRSMVRNMGIAADLGYLKVPDRVLVDVKKLDNYPD
DEVVLICTGSQGEPMAALSRMANRDHRIDVGDGDTVLLASSLIPGNENAVYRVINGLMRL
GADVVHKGNAKVHVSGHASAGELLYCYNIVKPRNVMPVHGEWRHLVANADLAIQTGVDPD
HVVLAEDGVVVDLVDGRARITGAVPCGYVYVDGSSVGGATEELLKDRRILRDEGFISVMV
VVDSSTGKVIAGPEITARGFAEDDEIFTQVEPKIIAALDEAARKGTTDTHQLQQVVRRAV
GGWVGGKIRRRPMIIPVVVEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgcaccccgacctcgagctgccgccaccgctcgccgacggagccctgcgc
gtcgtcgcgctcggcggtctcggcgaggtcggccgaaacatggccgtcgtcgagcaccag
gggcagctgctcatcatcgactgcggcgtgctcttccccgaggaccatcagccgggcgtc
gacctgatcctgcccgacttcgagtacatcctcgaccggctcgacgacgtgcaggcgatc
gtcctcacccacggccacgaggaccacatcggcgccgtgccctacctgctcaagcacaag
cccgacatcccgctcgtcggctcgatgctcacgctcgccctcatcgaggccaagctcaag
gagcaccggatcaagcccttcaccctcggggtcaaggagggcgggcgcgagagcttcggc
gtcttcgactgcgagttcatcgcggtcaaccactcgatccccgacgcgctggcggtcttc
gtgcgcaccgagggcggcaccctgctgcacacgggcgacttcaagatggaccagctgccg
ctcgaccgtcggctgaccgacctgcgggccttcgcccgggtcggcgaggagggggtcgac
ctcttcctcaccgactcgaccaatgccgaggtccccggcttcaccacccccgagcgcgag
atcgggccggcgatcgacaccgtcttccgcaatgcccagcgtcggatcatcgtcgcctgc
ttctccagccacgtgcaccgcgtccagcaggtcctcgacgccgccgagcgcaatggccgc
aaggtcgcgatggtcggtcgctcgatggtgcgcaacatgggcatcgccgccgacctgggc
tacctcaaggtgcccgaccgggtcctcgtcgacgtcaagaagctcgacaactaccccgac
gacgaggtcgtgctcatctgcacgggcagccagggcgagcccatggccgctctgtcgcgc
atggccaaccgcgaccaccgcatcgacgtcggcgacggcgacacggtgctgctcgcctcg
agcctgatccccggcaacgaaaatgccgtctaccgggtcatcaacggcctcatgcggctg
ggcgccgacgtcgtgcacaagggcaacgccaaggtgcacgtctccggtcacgccagcgcg
ggcgagctgctctattgctacaacatcgtcaagccgcgcaatgtcatgccggtccacggc
gagtggcggcacctcgtcgccaacgccgacctggcgatccagacgggcgtcgaccccgac
cacgtcgtgctggccgaggacggcgtcgtcgtcgatctcgtcgacggtcgcgcgcgcatc
accggggcagtgccctgcggctacgtctacgtcgacggttcgagcgtcgggggtgcgacc
gaggagctgctcaaggaccgtcgcatcctgcgcgacgagggcttcatctccgtcatggtc
gtcgtcgactcctcgaccggcaaggtcatcgccggtccggagatcaccgcccgcggcttc
gccgaggacgacgagatcttcacccaggtcgagcccaagatcatcgcggcgctcgacgag
gcggcccgcaagggcacgaccgacacccaccagctgcagcaggtcgtgcgccgtgccgtc
ggtggctgggtcggcggcaagatccgccgacgcccgatgatcatcccggtggtcgtcgag
gcctga
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