Janibacter sp. YB324: H7A72_10575
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Entry
H7A72_10575 CDS
T08461
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jay
Janibacter sp. YB324
Pathway
jay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7A72_10575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jay03019
]
H7A72_10575
03400 DNA repair and recombination proteins [BR:
jay03400
]
H7A72_10575
Enzymes [BR:
jay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7A72_10575
Messenger RNA biogenesis [BR:
jay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H7A72_10575
DNA repair and recombination proteins [BR:
jay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H7A72_10575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
HEM4
Pribosyltran
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QNF93234
LinkDB
All DBs
Position
2178577..2180691
Genome browser
AA seq
704 aa
AA seq
DB search
MTTQTSSLHDDATAVLRQLVGRDDVTFRDGQREAIEALVGGGRRVLVVQRTGWGKSAVYF
VASRLQRAKGAGPALIVSPLLALMRDQIAAAERAGVRAVSMNSANAQEWDEVRGRLARDE
VDVLLVSPERLNNPRFRAEQLPDLTRRCGLLVVDEAHCVSDWGHDFRPDYRRIKDLLGEL
PAGTPVLATTATANERVVHDVAEQLAAGTEGEVLTVRGPLARDSLRLAVLPRSGMDRHLA
WLTTHLGRLEGSGIIYTLTVSAAEDVAAALQAAGHEVAAYTGRSDAEERASMEEALRHNR
VKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATERADVVLLPGHDDVS
IWKHFASSSMPREDQAAAVITALAEAGRPLSTAALETIVDIRRTRLELLLKVLDVDGAVE
RVSGGWIGTGQPWVYDAERYERVAAAREAEQQHMLDYIDTTGCRMAFLQRTLDDASARDC
GRCDRCAGPWIDAEVADDALGSARSTLDRAGVDLDPRAQWPSGMDRLGVPVKGRIPADEA
MSPGRALARVTDLGWGPRLRELLSEDQPVPDQVVRAVVRVLAEWGWQTRPAGIVVVPSRS
RPTLVTSLADQLGQIGRLPVLGALTPVDGGPVGEPGGNSAYRLAGVWERLTVDPELAHQL
PGLTGPVLLVDDVVHSRWTMTTAARALRRAGSQEVLPFALAVDG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacagaccagctccctccacgacgacgcgaccgctgtcctgcggcagctcgtc
ggccgcgacgacgtcaccttccgcgacggacagcgcgaggcgatcgaggccctcgtcggg
ggtgggcggcgggtgctcgtcgtccagcgcaccgggtggggcaagtccgcggtctacttc
gtcgcctcgcgcctgcagcgggcgaagggagccggcccggcactcatcgtctcgccgctg
ctcgcgctcatgcgcgaccagatcgccgccgccgagcgggctggcgtgcgcgccgtgtcg
atgaactcggccaacgcccaggagtgggacgaggtccggggccggctcgcccgcgacgag
gtcgacgtcctgctcgtcagccccgagcggctcaacaacccccggttccgcgccgagcag
ctgcccgacctcacccggcggtgcggtctgctcgtcgtcgacgaggcgcactgcgtcagc
gactggggccatgacttccgccccgactaccgccggatcaaggacctgctgggcgagctc
cccgcgggcaccccggtgctcgcgacgaccgcgacggccaacgagcgcgtcgtccacgac
gtcgccgagcagctggcagccggcaccgagggcgaggtcctcaccgtccgcgggccgctc
gcccgcgacagcctccggctggccgtcctcccacggtccgggatggaccgccacctcgcc
tggctcaccacccacctcggccggctcgagggcagcggcatcatctacaccctgacggtg
agcgctgccgaggacgtcgccgccgcgctgcaggccgccggccacgaggtcgccgcctac
accggccggtccgacgcggaggagcgggcgtcgatggaggaggccctgcgccacaaccgg
gtcaaggccctcgtcgcgacgagcgccctcggcatgggcttcgacaagcccgacctcggg
ttcgtcgtccacctcggtgccccctcgtcgcccgtcgcctactaccagcaggtcggtcgc
gccggccgcgccacggagcgggccgacgtggtcctgctgcccgggcacgacgacgtgtcg
atctggaagcacttcgcctcctcctccatgccccgcgaggaccaggccgcggccgtcatc
accgcgctcgccgaggccggccgtcccctgtcgacggccgccctcgaaacgatcgtcgac
atccggcgcacgcggctggagctgctgctcaaggtgctcgacgtcgacggcgcggtcgag
cgggtgagcggtggctggatcggcaccggccagccctgggtctacgacgcggagcgctac
gagcgggtcgccgccgcccgtgaggccgagcagcagcacatgctcgactacatcgacacc
accggctgccggatggccttcctccagcgcaccctcgacgacgcgagcgcacgggactgc
ggccgctgcgaccgctgcgccggcccgtggatcgacgccgaggtcgccgacgacgcactc
ggctcggcccgctccacgctcgatcgggccggtgtcgacctcgacccgcgggcccagtgg
ccgagcggcatggaccgtctcggggtcccggtcaagggacgcatccccgccgacgaggcc
atgtcgcccggtcgcgctctggcgcgcgtcaccgacctcggctggggcccacggctgcgc
gagctcctctccgaggaccagccggtaccggaccaggtggtccgcgccgtcgtccgggtg
ctcgccgagtgggggtggcagacccgccccgccggcatcgtcgtcgtcccctcgcggtct
cgcccgacgctcgtcacctcgctcgccgatcagctcgggcagatcggccggctgccggtg
ctcggtgcgctcacccccgtcgacggcggacccgtgggcgagccgggcggcaactccgcc
taccgcctcgccggggtgtgggagcggctgaccgtcgaccccgagctcgcccaccagctc
ccgggcctcaccggaccggtcctcctcgtcgacgacgtcgtccactcccggtggacgatg
accacggcggctcgggccctgcgtcgggccggatcacaggaggtcctccccttcgccctc
gccgtcgacgggtga
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