Janibacter sp. YB324: H7A72_13100
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Entry
H7A72_13100 CDS
T08461
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
jay
Janibacter sp. YB324
Pathway
jay03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
jay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H7A72_13100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jay03400
]
H7A72_13100
Enzymes [BR:
jay01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
H7A72_13100
DNA repair and recombination proteins [BR:
jay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H7A72_13100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QNF93674
UniProt:
A0A7G7HRL0
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All DBs
Position
2673401..2674336
Genome browser
AA seq
311 aa
AA seq
DB search
MRPMLATLAEAVPRGPDWVHEIKWDGMRVLADVRGGGLTLTSRSGRDVTVSFPELVPLAD
LFDDMLLDGEVVSLVDGRPSFGALAERMHIGDARRAARAAVAHPVTFVVFDVVRLLGQDL
TGQPWSARRALLEQLELDGPRVQVPPVHDDGERLLAATAEQGLEGIVSKRRSSTYAPGRR
SPDWLKLPHRDGISVVVCGWRPEVGGSRLGAVLVGLPGPAGWDFVGRVGSGLAGRAGAGL
LARLRPLEVTGSPFVGEVPREDATGTTWVEPQVVIDVASLGRSSGGRLRQPSFQRVRTDL
TATDLQETSDG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgatgctcgccaccctcgccgaggccgtcccgcgcggccccgactgggtgcac
gagatcaagtgggacggcatgcgggtgctcgccgacgtacgcgggggcggactgacgctc
acgagccggtcgggccgagacgtcacggtctccttccccgagctcgtcccgctcgccgac
ctcttcgacgacatgctcctcgacggcgaggtggtctccctcgtcgacggacgaccgagc
ttcggcgcgctcgccgagcggatgcacatcggcgacgcccgccgcgctgcccgggccgcg
gtcgcccacccggtgaccttcgtcgtcttcgacgtcgtgcggctgctcggccaggacctc
accggccagccgtggtcggcccgccgagccctcctcgagcagctcgagctcgacggcccg
cgcgtgcaggtcccacccgtccacgacgacggcgagaggctgctcgcggccaccgccgag
caggggctcgagggcatcgtgtccaagcgccgcagctcgacctatgctcccggccgccgc
tcccccgactggctcaagctcccccaccgcgacggcatctcggtcgtcgtctgtgggtgg
cgtcccgaggtcggcggctcacgtctcggcgccgtgctcgtcggcctgccgggccccgcg
gggtgggacttcgtcgggcgggtcggctccgggctcgccggccgggccggcgccggcctg
ctggcacggctgcggccgctcgaggtgacgggatcccccttcgtcggggaggtgccgcgc
gaggacgcgaccggcacgacctgggtggagccacaggtcgtcatcgacgtcgcgagcctg
ggccgcagctccgggggccggctgcggcagccctccttccagcgggtgcgcacggacctg
accgccaccgacctgcaggagacgagcgatggctga
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