Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_02375
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Entry
YQ44_02375 CDS
T04539
Name
(GenBank) RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YQ44_02375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jaz03021
]
YQ44_02375
Transcription machinery [BR:
jaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YQ44_02375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_24
HTH_10
GerE
HTH_28
HTH_38
Sigma70_r3
Rv2175c_wHTH
Xre-like-HTH
HTH_31
Fe_dep_repress
HTH_11
HTH_IclR
TnsD
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_29
HTH_40
HTH_3
MarR_2
HTH_20
TetR_C_16
HTH_7
HTH_Mga
UPF0122
Motif
Other DBs
NCBI-ProteinID:
APA66850
LinkDB
All DBs
Position
547186..547695
Genome browser
AA seq
169 aa
AA seq
DB search
MSAADFAQQQDLHALYSSHHGWLQGWLRHKLGNAGEAADLAQDTFISVLANGMAPQIREA
RPFLATIARRLVAHRYRRQVLEDAYLEALACLPPEAAPAPEARLLALEVLQEIDTALDGL
PAPVRTAFLLAQLEGLSYAEIAARLNVSASSVKQYLTRANRQVFFSLPA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccgattttgcccagcaacaagacctgcacgcgctctacagcagccatcac
ggctggctgcagggctggctgcggcataagctgggcaatgcgggcgaggcggccgacctg
gcgcaagacaccttcatcagcgtgcttgccaacggcatggcgccgcaaatccgcgaggcg
cgcccttttctcgccaccatcgcgcggcgcctggtggcgcaccgctaccgccgccaggtg
ctggaagacgcctacctggaggcgctggcctgcttgccgcccgaggcggcgcccgcgccg
gaagcgcgcctgctggcgctcgaagtcttgcaggaaatcgacacggccctcgacggcttg
cccgctcccgtgcgcacggctttcctgctggcgcagctggaaggcctcagctatgccgag
atcgccgcgcgcctgaacgtgtcggccagctcggtgaagcagtatctgacgcgcgccaac
cgccaggtgtttttctccctgccggcatga
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