Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_04505
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Entry
YQ44_04505 CDS
T04539
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jaz03009
]
YQ44_04505
Enzymes [BR:
jaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
YQ44_04505
Ribosome biogenesis [BR:
jaz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YQ44_04505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
APA67212
LinkDB
All DBs
Position
1029387..1030382
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AA seq
331 aa
AA seq
DB search
MKSQNDVVPPSTPPVQPQAQFVTIAEEEAGQRIDNYLLRVCKGVPKSHIYRILRSGEVRV
NKGRIDQLYRLAAGDVVRIPPVRVAEKAPTGAPAAEFAIIFEDAQLLVIDKPAGVAVHGG
SGVSFGVIEQLRASRPDAKFLELVHRLDRDTSGLLLLAKKRSALTNLHEQMRDGVTDKRY
LVLVAGDWKNARQHIKLPLHKYTTAEGERRVAVQADGLASHTVFSLLHKYHNFALLEAEL
KTGRTHQIRVHLSSSGFPIAGDDKYGDFALNRALLKADSTRGALKRMFLHAHQITFTHPE
TGKTMTLNAPLAAECQRFLVSLGKPLAVAPR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtcaaaatgatgttgttcccccttcaacacccccggttcagccgcaagcccaa
ttcgtaacgatcgccgaggaagaagcaggccagcgcatcgacaactacttattaagagtg
tgcaagggagtgcctaaaagccacatctaccggatcttgcgatcgggagaagtgcgggtc
aataaaggccgtatcgatcagctgtaccgtctcgccgccggcgacgtggtgcgcattccc
cccgtgcgcgtggccgaaaaggcgcccacgggcgcgccggccgccgaatttgccatcatc
ttcgaagacgcgcagctgctcgtcatcgacaagccggccggcgtggccgtgcatggcggc
tcgggcgtgtcgttcggcgtgatcgagcaattgcgcgcttcgcgtcccgacgccaagttc
ctcgagctggtgcaccgcctggaccgcgacacgtccggcctgttgttgctggcaaagaaa
cgttccgcgctgaccaacttgcacgagcagatgcgcgacggcgtcacggacaagcgctat
ctggtgctggtggccggcgactggaagaatgcgcgccagcatatcaagttgccattgcat
aaatatacgacggccgaaggcgagcgccgggtggccgtgcaggccgatggcctggcctcg
cacacggtgttttcgctgttgcataaatatcacaacttcgccttgctggaagcggaattg
aagacgggacgcacgcaccagatccgcgtgcacctgtcttcgtctggcttccccatcgcc
ggcgacgataaatatggcgactttgccctcaaccgtgccctgttgaaagccgacagcacg
cgcggcgccctgaaacgcatgttcctgcatgcgcatcaaatcacgttcacgcatccggaa
acgggcaagacgatgaccttgaacgcgccgctggctgccgaatgccagcgtttcttggta
agcttgggcaaaccgttggccgttgccccacgttaa
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