Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_07935
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Entry
YQ44_07935 CDS
T04539
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YQ44_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jaz03019
]
YQ44_07935
03009 Ribosome biogenesis [BR:
jaz03009
]
YQ44_07935
03036 Chromosome and associated proteins [BR:
jaz03036
]
YQ44_07935
Enzymes [BR:
jaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YQ44_07935
Messenger RNA biogenesis [BR:
jaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YQ44_07935
Ribosome biogenesis [BR:
jaz03009
]
Eukaryotic type
90S particles
RNase
YQ44_07935
Prokaryotic type
rRNA processing factors
YQ44_07935
Chromosome and associated proteins [BR:
jaz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YQ44_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
APA67788
LinkDB
All DBs
Position
1779368..1780183
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AA seq
271 aa
AA seq
DB search
MNLQLLQTRLGYTFQDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERFKAI
DEGDLSRLRANLVKQQSLYEIAQKLELSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDTGFDAASTVIRAFYIPILDSVDPQTLGKDAKTLLQEFLQSKKISLPQYNVVATHGAA
HSQEFEIECLVPKLNIQVYGRGGSRRAGEQAAAKLALDVAEQALVKSPAASRKPKPRAAQ
LKLAGIATIQSDDAGAPAAPAIAAHTKQNRH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcagctattgcaaacccgtttaggctatacgttccaggatgctggcctgttg
cagcaagccttgacgcatcgtagccacagcagtttgcataatgagcggctggaattcctc
ggcgactccatcctcaactgcgtggtcgcttccatcctgtacgaacgcttcaaggccatc
gacgagggcgacctgtcgcgcctgcgcgccaacctggtgaagcagcagtcgttgtatgaa
atcgcgcaaaagctggaattgtcgcaattcctgcgcctgggcgaaggcgagctgaagtcg
ggcggtttccgccgtccgtccatcctcgccgacaccctggaagccttgctgggcgccatc
ttcctcgatacgggcttcgatgcggccagcacggtgatacgcgccttctacattcccatc
ctcgactcggtcgatccgcaaacgctgggcaaggatgccaagaccttgctgcaggagttt
ttgcaaagcaagaaaatttcgctgccacaatataatgtggtggcgacccacggcgccgcc
cacagccaggaattcgagatcgaatgcctggtgccgaaattgaatatccaggtctacggc
cgtggcggaagccgccgcgccggtgagcaagccgccgccaaactggcgctggacgtggcc
gagcaggcgctcgtgaagtcgccagccgccagccgcaagcccaaaccgcgcgccgcccag
ctcaagctggctggtattgccaccatccagagcgacgacgcgggcgccccggcggccccg
gccatcgccgctcacactaaacagaatcgacactag
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