Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_11435
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Entry
YQ44_11435 CDS
T04539
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jaz03009
]
YQ44_11435
Ribosome biogenesis [BR:
jaz03009
]
Prokaryotic type
ribosomal protein modification factors
YQ44_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
APA68336
LinkDB
All DBs
Position
2627281..2629482
Genome browser
AA seq
733 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNISTEHIRLSQNNIVDPENRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
GPEFVIEEVENLDADAQALLTLNAAPGASTYITGKDLPLEQTIANMSGLLAGLGIKIEIA
SWRNIIPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERISNNHFYAGSFWGVD
IANAPFVHYPNERWFKPGRKDALPDGILDAYSLDIYNPDGELRASHLVDTNSGNAERGIC
SLPYVRQSDGEVVYFPSNLIENLYVSNGMSAGNTLVEAQVQCLSEIFERAVKREILEGEI
ALPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGTYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFASEAVTEPNNFVEHFIDSSGIVSWRF
FSAKADYDFVEWDFSGHGDDSNAEEAATLFGILADMGKEVYTAVYDQLGATACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDEASLEDLLERLENSELDEYGDIATLIGIE
FDENTVWGQLTTLELKLLIQLALQQFEEAKELVETFLQYNDNTVERRLFYQALNVVLEVE
LDDELELDDYAVNFRRMFGNERMDAVLGSVDGSVRFYGLTPTSMQLEGLDRHQRLIDSFK
KLHAARARAAAIG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagtcaactttctcgacaagctgcgtctcgaagccaagttcgatgatttt
acggtcattgccgaccagcccatccgttacaagggcgatggctcggcgccgggcccgttc
gattattttttggcctcgtcggccctgtgcgccgcgtatttcgtgaagttgtattgcgat
acacgcaatatttccaccgaacatatccgcctgtcgcaaaataatatcgtcgacccggaa
aaccgttaccagcagatcttcaagatccaggtcgaattgccggccgatatctccgccaag
gatcgccagggcatcctgcgttcgatcgaccgctgcacggtgaaaaaagtggtgcagacg
ggccccgagttcgtgattgaagaagtcgagaacctcgacgccgatgcccaggccctgctg
accctgaatgcggcgccgggggcgagcacctatattaccggcaaggatttgccgctggaa
caaaccatcgccaatatgtcgggcctgctggcgggcctgggcatcaagattgaaatcgcg
tcgtggcgcaacatcattcccaatgtgtggtcgctgcatatccgcgatgcccattcgccc
atgtgctttaccaacggcaagggcgcgaccaaggaaagcgcgctggcctcggccctgggc
gagtatatcgagcgcatcagcaacaaccatttctatgccggttcgttctggggcgtagac
atcgccaacgcgccgttcgtgcactatccgaacgagcgctggttcaagcctggccgcaag
gatgccttgcccgacggtattctcgatgcatacagcctggacatctacaatcccgatggc
gagctgcgcgcctcgcacctggtcgacaccaactccggcaatgccgagcgcggcatctgt
tcgctgccgtatgtgcgccagtcggatggcgaggtcgtgtacttcccgtcgaacctgatc
gaaaacctgtatgtcagcaatggcatgagcgccggcaataccctcgtcgaagcgcaggtg
caatgtttgtcggaaattttcgaacgggccgtcaagcgcgaaatccttgaaggcgagatc
gccttgcccgacgtgccgcaggaagtgctggcgaaatatccgggcatcctggccggcatt
cagggcctggaggagcagggcttccccgtgctggtgaaggatgcgtcgctgggcggcacc
taccccgtcatgtgcgtgaccttgatgaatccgcgcacgggcggcgtgtttgcctcgttc
ggcgcacacccgagcctggaagtggcgctcgagcgcagcctgacggaattgctgcagggc
cgcagctttgaaggcctcaacgatttgccgcagcccacgtttgccagcgaagccgtcacc
gagccgaacaactttgtcgaacatttcatcgactcgagcggcatcgtgtcgtggcgcttt
ttcagcgcgaaagccgattacgattttgtcgagtgggatttttccggccacggcgacgac
tcgaatgccgaggaagcggcgaccctgttcggcatccttgccgacatgggcaaggaagtc
tacacggccgtgtatgaccagctgggcgccaccgcctgccgcatcctcgtgcccggttat
tcggaagtgtatccagtcgaggatttgatctgggacaataccaacaaggccttgctgttc
cgcgccgacatcctgaacctgcatcgcctggacgaagccagcctggaagacttgctcgag
cgcctggagaacagcgagctggacgagtacggcgacatcgccaccctgatcggcatcgaa
ttcgatgaaaatacggtgtggggacagttgacgacgctggaattgaaactgctgatccag
ctggccttgcagcaattcgaggaagccaaggagctggtggaaaccttcttgcagtacaac
gacaacacggtcgagcgccggctgttttatcaggccttgaacgtggtgctggaggtagag
ctcgacgacgagctggagctggacgattacgcggtcaatttccgccgcatgtttggcaac
gaaaggatggacgccgtgctcggttcggtggacggcagcgtgcgtttctacggcctgacg
cccaccagcatgcagctggaagggctggaccggcaccagcgcctgatcgacagcttcaag
aaactgcacgcggcgcgggccagggcggcagccatcggctga
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