Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_13435
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Entry
YQ44_13435 CDS
T04539
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jaz03032
]
YQ44_13435
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_13435
Enzymes [BR:
jaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
YQ44_13435
DNA replication proteins [BR:
jaz03032
]
Prokaryotic type
DNA Topoisomerases
YQ44_13435
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YQ44_13435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
APA68640
UniProt:
A0A1I9XXZ8
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All DBs
Position
3075906..3077015
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AA seq
369 aa
AA seq
DB search
MDISATTTARAAGLRYTGDHQPGLVRLGKPAKFRYVDADGQAVRDDDTLTRIKALAIPPA
WTDVWICARANGHLQATGRDARGRKQYRYHARWRQVRDEVKYERMLSFGKALPAIRAAVA
RGMQLPGLPREKVLATIVHLLELTMMRIGNEEYARTNKSFGLTTLRTRHVQVDGSAVAFH
FKGKSGVRHDIRLSDRRLARVLQRMRELPGQELFQYVDDAGERHGVDSGAVNDYLREVTG
EDYTAKDFRTWAGTLLAALALQAFELVDSDAQAKKNIVQAIESVAKKLGNTPTICRKCYV
HPAVLEAYLDGSLLEGMRARARQQLQEDLPALAPEEAAVLALLQQRLQGEAKDQAGVRPR
AAAGTAPTA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatatctccgccaccaccaccgccagggccgccggcctgcgctacacgggcgaccac
cagcccggcctcgtccgcctgggcaaaccggccaagttccgctatgtggacgcggacggc
caggccgtgcgcgacgacgacaccttgacgcgcatcaaggcgctggccattccgcccgcc
tggaccgatgtgtggatctgtgcgcgcgccaacggccacctgcaggcgacggggcgcgat
gcgcgcggccgcaagcagtaccgctaccatgcgcgctggcgccaggtgcgcgacgaagtg
aaatatgaacgcatgctcagctttggcaaggccctgcccgccatccgcgccgccgtcgcg
cgcggcatgcagctgcccggcttgccgcgggaaaaagtgctggccaccatcgtgcatctg
ctggaattgacgatgatgcgcatcggcaacgaggaatatgcacgcacgaacaagtcgttc
ggcctgaccaccttacgcacgcgccacgtgcaggtcgatggcagcgccgtggccttccat
ttcaagggcaagagcggcgtgcgccacgatatccgcctcagcgaccgccgcctggccaga
gtgctgcagcgcatgcgcgagctgccggggcaggaactgtttcagtatgtcgacgacgcg
ggcgagcgccacggcgtcgattcgggcgcggtcaatgactacctgcgcgaagtgacgggc
gaggactatacggccaaggatttccgcacctgggccggcaccctgctggccgcgctggcg
ctgcaggcattcgaactggtcgattccgatgcgcaagccaagaagaacatcgtgcaggcg
atcgagtcggtggcgaaaaagctgggcaacacgccgaccatctgccgcaagtgctatgtg
cacccggccgtgctggaagcgtatctggatggcagtctgttggaaggcatgcgcgcgcgg
gcgcggcagcaactgcaggaggacttgccggcgctggcgccggaagaagcggccgtgctg
gccttgctgcaacaacgcttgcagggcgaggcgaaggaccaggccggcgtcaggccgcgc
gccgcggctggcactgcgccgacagcttga
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