Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_15380
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Entry
YQ44_15380 CDS
T04539
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YQ44_15380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_15380
Enzymes [BR:
jaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
YQ44_15380
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YQ44_15380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
APA68953
UniProt:
A0A1I9XYW1
LinkDB
All DBs
Position
complement(3560831..3564250)
Genome browser
AA seq
1139 aa
AA seq
DB search
MQTPVTPGLLILHGNQLEQLRAAVFQWLRNHPLAPLETDIFLVQSNGVAEWLKIALAEEM
GVCAATRIALPARLLWESYRGMLGRERVPRVSPFDKSPLTWRLMRLLPSLLADPVFAPLR
YFLADGDAERRLQLAERLADLFDQYQVYRADWLADWAAGRDMLRTARGESIALREDQRWQ
AQLWRAVGLDVDAAERDTGRADIHDAFLAAIAAGEEAAGKLPRRVVLFGVSALPYQTLQA
LAALARHTQVVLAVPNPCQFYWGDIIDGRDLLRAQNKRQRQRNGTDLAEIPLEELHAHSH
PLLASWGRQGRDFIRMLDEFDEHAAAEGRDDSLRIDLFGEETGETLLQQVQVAIRELRPL
AEHAQTPPEAADRSIEFHVAHSVQREVEVLHDQLLAMFAHSGETGLRPRDVVVMVPDIDT
FTAAIHAVFGQCRRNDERFIPFEIGDVKDRSVNPLLVALEWLLQLPQQRCRQSEVRDLLD
VPALAARFGLQPDDLVTLGAWIEGAGVRWGLDQHHRSGLGLGAAGEQNAWIFGVRRMLLG
YASGVGVSFGGIEPYAEVGGLDAALAGSLAQLVEALLHWRGVLAGARTPAEWGEQARALL
AAFFDADDEGDRLTLAQLEGALQGWLETCEHAGFIEPVPLSVLRVAWLGALDEPTLNHQF
VSGGVTFCTLMPMRAVPFRVVCLLGMNDGDFPRRAQKADFDLLALPGMARPGDRSRRDDD
RYLMLEALLAARDKLYVSWVGRNVRDNSEQPPSVLVSQLRDYLAAGWSLDRHLASLTTVH
ALQPFSRRYFEAGGLLTYAREWRVAHADAQAQAETLPLGPYELDPGTRLKLGELASFLRQ
PVKYFFRRRLSVHFADAAMLGEDEEPFGLNALERYLLEDTMLDDAGAVEALDDVRASLQG
RAQRLAREGVLPIGLIGQQVQEQLVEALLPVRSAWLSLRASFPLAADKRAVNLAFGDVQI
DDWLDKLCSNGQETAWLMQISSKVMNKAGQARGDKLMLMWLRQLAAAALGLSVTGYLVAR
DAIVCMAPLDAASSRAALATLLALWREGMNHPLPTACKTGLALVQDGDPRAVYDGGFEVS
GEREELCLARLWPDFSALALEEAWQDCTRELYGPLAEWLRAHITLDPISAPVDGAGEEA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcccgtcacgcccggcctcctcatcctgcacggcaaccagctggagcagctg
cgcgccgccgtcttccagtggctgcgcaaccatccgctggcgccgctggagaccgacatc
ttcctggtgcagtcgaatggcgtggccgaatggctgaagatcgcgctggccgaggagatg
ggcgtgtgcgccgccacgcgcatcgcgctgccggcgcgcctgctgtgggaaagctaccgg
ggcatgctgggccgcgaacgcgtgccgcgcgtgtcgccgttcgacaagtcgccgctgacg
tggcgtttgatgcgcttgctgccgtcgctgctggccgatcccgttttcgcgccgctgcgc
tatttcctggccgatggcgatgccgagcgccggctgcagctggccgagcgcctggccgac
ctgttcgaccagtaccaggtctaccgcgccgactggctggccgactgggcggcggggcgc
gacatgctgcgcacggcgcgcggcgagtccatcgcgctcagggaagaccagcgctggcag
gcgcagttgtggcgcgccgtgggcctcgatgtcgacgcggccgagcgcgacacgggccgc
gccgacatccatgacgccttcctggcggcgattgccgccggcgaggaagcggccggcaag
ctgccgcgccgcgtggtgctgttcggcgtgtcggccctgccgtatcaaaccctgcaggcg
ctggccgcgctggcgcgccacacgcaggtggtgctggccgtgcccaatccgtgccagttc
tactggggcgacatcatcgacgggcgcgacttgctgcgcgcgcaaaacaagcgccagcgc
cagcgcaacggcaccgacctggccgagattccgctcgaagaactgcatgcgcacagccat
ccgctgctggccagctggggcaggcaggggcgcgacttcatccgcatgctcgatgaattc
gacgagcatgcagccgccgaagggcgcgacgacagcctgcgcatcgacctgttcggcgag
gaaacgggcgagaccctgctgcagcaggtgcaggtggccatccgcgaactgcgcccgctg
gccgaacacgcgcaaacgccgcccgaggcggccgaccgctcgatcgaattccacgtggcg
cacagcgtgcagcgcgaggtggaggtgctgcacgaccagctgctggccatgtttgcgcat
agcggcgagacgggcctgcgcccgcgcgacgtggtggtgatggtgcccgacatcgacacc
ttcacggccgccatccacgccgtgtttggccagtgccggcgcaacgacgagcgtttcatc
cccttcgagatcggcgacgtgaaggaccgcagcgtcaatccgctgctcgtcgcgctcgag
tggctgctgcagctgccgcagcagcgctgccgccagagcgaggtgcgcgacctgctcgac
gtgccggcgctggcggcccgtttcggcctgcagccggacgacctggtcaccctgggcgcc
tggatcgaaggggccggcgtgcgctggggcctggaccagcatcaccgcagcggcctggga
ctgggcgcggccggcgaacagaatgcgtggatcttcggcgtgcggcgcatgctgctcggc
tatgccagcggcgttggcgtcagctttggcggcatcgagccgtatgcggaagtgggcggc
ctcgatgcggcgctggcgggctcgctggcgcagctggtcgaggcgctgctgcactggcgc
ggcgtgctggccggcgcgcgcacgccggccgagtggggcgagcaggcgcgcgcgctgctg
gcggcctttttcgacgccgacgacgagggcgaccgcctgaccctggcgcagctggaaggc
gccttgcagggctggctggaaacctgcgagcacgcgggcttcatcgaaccggtgccgctg
tccgtgctgcgcgtggcgtggctgggcgcgctcgacgaaccgaccctgaaccatcaattc
gtctccggcggcgtcaccttctgcacgctgatgccgatgcgcgccgtgccgttccgcgtc
gtctgcctgctgggcatgaacgatggcgacttcccgcgccgcgcgcagaaagccgatttc
gacctgctggcgctgccgggcatggcgcgcccgggcgaccgttcgcgccgcgacgacgac
cgctacctgatgctggaagccctgctggccgcgcgcgacaagctgtacgtcagctgggtg
gggcgcaatgtgcgcgacaattccgaacagccgccctccgtgctggtgtcgcagctgcgc
gattatctggcggccggctggtcgctggaccgccacctggccagcctgacgacggtgcat
gcgctgcagccgttcagccgccgctatttcgaggccggcggcctgctcacgtatgcgcgc
gaatggcgcgtggcgcatgccgacgcgcaggcgcaggccgagacgctgccgctggggccc
tacgaactcgatcccggcacgcgcctgaaactgggcgagctggccagcttcctgcgccag
cccgtcaagtatttcttccgccgccgcctcagcgtgcattttgccgatgcggccatgctg
ggcgaggatgaggaaccgtttggcctgaatgcgctcgagcgctatctgctggaagacacc
atgctcgacgacgcgggcgccgtggaagcgctcgacgacgtgcgcgccagcctgcagggc
agggcgcagcgcctggcacgcgagggcgtgctgccgatcggcctgatcgggcagcaggtg
caggagcagctggtcgaggcgctgctgcccgtgcgcagcgcctggctgtcgctgcgcgcc
tcgttcccgctggcggccgacaagcgcgccgtgaacctggcgttcggcgacgtgcagatc
gacgactggctcgacaaattatgcagcaacgggcaggaaacggcctggctgatgcagatt
tcctcgaaagtgatgaacaaggccggccaggcgcgcggcgacaagctgatgctgatgtgg
ctgcgccagctggccgccgccgccctcggcctttccgtcaccggctacctggtggcgcgc
gacgccatcgtctgcatggcgccgctcgatgccgccagttcgcgcgcggcgctggcgacc
ctgctggcgctatggcgcgaaggcatgaaccatccgttgccgacggcttgcaagacgggc
ctggcgctggtgcaggatggcgacccgcgcgccgtctacgatggcggctttgaagtctcg
ggcgaacgcgaggagctgtgcctggcgcgcctgtggcccgatttttccgcgctggcgctc
gaggaggcgtggcaggactgcacgcgcgagctgtatggcccgctggccgaatggctgcgc
gcacacatcaccctcgacccgatcagcgcgcctgtcgatggcgccggagaagaagcatga
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