Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_17090
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Entry
YQ44_17090 CDS
T04539
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03420
Nucleotide excision repair
jaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YQ44_17090
03430 Mismatch repair
YQ44_17090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_17090
Enzymes [BR:
jaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YQ44_17090
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YQ44_17090
MMR (mismatch excision repair)
Other MMR factors
YQ44_17090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APA69213
UniProt:
A0A1I9XZM1
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All DBs
Position
complement(3953342..3955288)
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AA seq
648 aa
AA seq
DB search
MSTDNAPQFLPKRITPTPEQVAIQTAQKKVVLIDANAGAAKTTTLALRLAEALHRGRAPE
RMLALVFTEAARVALRQRLLEVGVPLGVVKRLVIDTFDAFAAKVLLQLEHVQVAFMRSDE
ELRPVAWEALEVVSEKYAHRYPLEINTTNGAIAEFLKLQLRTKARLDFQNPDFESNSLDD
NLELLGMSRTHYLWLREYEGLRGADTGDIQFRAPFDATYDLVRMLDGDEPLRQQLPAFQI
IVADELHDLNEASFRLLTMLIRRGNAFFCGAGDKDQVIYTWSGADHRFLRQRFEQEFPAL
QRLPLTASYRYGTQLAHAVGVLKNKASVSALSRATHIEVLQYDHALPQACSAQLIAALEH
AHAGTTAILLRDRDQAIRVETALFQSGIAYGLVDMNSYLLSQEVLMLRGMVAIARKDLHA
IKSGPRRGEILEALVAFAEIPFTRGELQQAKADVANYPDLLEGFLTNQLGKSQNQDKAAL
TLAAVDYLRALPPDALAGDALQHIFGLMQLEQTARRIYVDPAQARVVARSLHGFIAVCSE
AGVALGGFAGWLGEMEDAVAVTSGKAKLVIACIDQIKGLEYNHVILPYLAVDEFPRSKTD
PLEEENRFYVAATRARDRLTLLTPEDPAYRSRYIAALQLKQKIVAPKS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagataacgccccgcagttccttcccaaacgcatcacgcctacgccggaacag
gtcgccatccagacggcgcaaaagaaagtggtcttgatcgacgccaatgccggcgccgcc
aagacgacgaccctggccctgcgcctggccgaagcgctgcaccgtggccgcgcgcccgag
cgcatgctggccctggtcttcacggaagcggcgcgcgtggccctgcgccagcgcctgctg
gaagtgggcgtgccgctcggcgtcgtcaagcgcctcgtcattgacaccttcgatgcattt
gccgccaaggtgctgctgcagctggaacacgtgcaggtggcgttcatgcgcagcgatgaa
gagctgcgcccggtggcgtgggaagcgctggaggtggtgtcggagaaatacgctcaccgc
tacccgctggaaatcaatacgacgaatggcgccatcgccgaattcctcaaattgcagctg
cgcaccaaggcgcgcctggatttccagaatcccgacttcgagagcaattccctggacgac
aacctggagctgctgggcatgtcgcgcacgcattatctgtggttgcgtgaatacgaaggc
ttgcgcggcgccgacacgggcgatatccagttccgcgcgccgttcgacgccacctacgac
ctggtgcgcatgctcgatggcgacgagccgctgcgccagcagttgccggccttccagatc
atcgtcgccgatgaattgcacgacttgaacgaggcgtcgttccgcctgctgaccatgctg
atacgccgcggcaacgcgtttttctgcggcgccggcgacaaggaccaggtcatttatacg
tggtcgggcgccgatcaccgcttcctgcgccagcgcttcgagcaggaattccccgccttg
cagcgcttgccgctgacggcgtcctaccgctacggcacgcaactggcgcacgccgtgggc
gtgctgaaaaacaaggccagcgtgtcggcgctgtcgcgcgctacccacatcgaggtgctg
cagtacgaccatgcgctgccgcaggcgtgcagcgcgcagctgatcgcggccctcgagcac
gcccatgcgggtacgacggccattttgctgcgcgaccgcgaccaggccatccgcgtggaa
acggcgctgttccagagcggcatcgcctatggactggtggacatgaacagctatttgctg
agccaggaagtgctgatgctgcgcggcatggtggccatcgcccgcaaggacttgcacgcg
atcaagagcggcccgcgccgcggcgagatcctcgaagccctggtggcgttcgcggaaatc
ccgtttacgcgcggcgagctgcagcaagccaaggccgacgtggccaattatccggacttg
ctggaaggattcctgaccaaccagctgggcaagtcgcagaaccaggacaaggcagcgctg
accctggctgccgtcgattacctgcgcgccttgcctcccgatgcgctggccggcgacgcg
ctgcagcacatcttcggcctgatgcagctggaacagacggcgcggcgcatctatgtcgac
ccggcccaggcgcgcgtcgtggcccgttcgctgcacggcttcatcgccgtctgcagcgaa
gcgggtgtggcgctgggcggctttgccggctggctgggcgagatggaggacgccgtcgcc
gtgaccagcggcaaggccaaactggtgatcgcctgcatcgaccagatcaagggcctcgag
tacaaccacgtgatcctgccttatttggccgtcgatgagttcccgcgcagcaagactgat
ccgctggaagaagaaaaccgcttctacgtggccgccacgcgcgcgcgcgacaggctcacc
ttgctgacgccggaagaccccgcctaccggagccgctacatcgccgccctgcagctcaaa
cagaagattgttgcgcccaagtcataa
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