Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_17215
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Entry
YQ44_17215 CDS
T04539
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_17215
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YQ44_17215
Archaeal homologous recombinant proteins
YQ44_17215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
APA69234
UniProt:
A0A1I9XZP2
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Position
3992120..3993346
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AA seq
408 aa
AA seq
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MRLLHTSDWHLGQTLHNHERGYEHQRFLDWLLDTLVAERVDVLLVAGDVFDNANPSAASQ
KQLYVFLQQARARLPALQLVVVAGNHDSAGRLEAPSPLLAAHGTHVIGHLLRDENGEIDL
ERLLLPLADSDGKVQAWCLAVPFLRPGDVPKLPAGDSQDAYLGGIALLYRQLADLALARR
QPGQALIAMGHCHMVGGEMSNDSERRIVIGGTEMLPSGIFDASIAYAALGHLHKAQAVGG
QAHIRYCGSPIPLSFAEVNYRHQVLCLDVDGEQLQSVRAIDVPRAVPLLRVPATPAPLDE
VLAQLAALDVPAAPPEAQPFLEVRVRLDAPEPGLRTRIETALDGKSVRLAKIETSSAARS
SAPESMTLDQLGQLQPDDIFRRLYQQKYAKEAPPELLSALAELLLPGA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacctccgactggcatctgggccagaccctgcataaccacgagcgg
ggctacgaacaccagcgcttcctcgactggctgctcgacaccctcgtggccgaacgggtc
gacgtgctgctggtggccggcgacgtgttcgacaacgccaacccgtcggccgcctcgcaa
aagcagctgtacgtgttcctgcagcaggcgcgcgcgcggctgcccgcgctgcagctggtc
gtcgtcgccggcaaccacgattcggcgggacggctggaagcgccctcccccttgctggcc
gcgcatggcacgcacgtgatcggccacctgctgcgcgacgaaaatggcgagatcgacctg
gaacgcctgttgctgccgctcgccgacagcgatggcaaggtgcaggcctggtgcctggcc
gtgcccttcctgcgccccggcgacgtgccgaaactgccggccggcgactcccaggacgcc
tatctgggcggcatcgccctgctgtaccgccagctggcggacctggcgctggcgcgccgc
cagcccggacaagccctcatcgccatgggccattgccacatggtgggcggcgaaatgtcg
aacgactccgaacgccgcatcgtcatcggcggcaccgagatgctgccgtcggggatcttc
gacgcctccatcgcgtatgcggcgctgggccacctgcacaaggcgcaagccgtgggcggg
caggcgcatatccgctattgcggcagcccgatcccgctctccttcgcggaagtcaactac
cggcatcaagtactgtgcctcgacgtcgacggcgaacagctgcagtccgtgcgcgccatc
gacgtgccgcgcgccgtgcccctgctgcgcgtgcctgccacgccggcgccgctagacgag
gtgctggcgcagctggccgccctcgacgtgcccgccgcgccaccggaagcgcaaccgttt
ctcgaagtgcgcgtgcgcctggacgcgcccgagccgggcctgcgcacgcgcatcgagacg
gccctcgacggcaagagcgtgcgcctggcaaagatcgaaacgtcgagcgccgcgcgcagc
agcgcgccggaaagcatgaccctcgaccagctgggccagctgcagcccgacgacatcttc
cgccgcctgtaccagcaaaaatacgccaaggaagcaccgcccgaactcctctcggccctg
gccgaactgctgctgcccggcgcttga
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