KEGG   Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_17215
Entry
YQ44_17215        CDS       T04539                                 
Name
(GenBank) exonuclease SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
jaz  Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:jaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jaz03400]
    YQ44_17215
DNA repair and recombination proteins [BR:jaz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YQ44_17215
    Archaeal homologous recombinant proteins
     YQ44_17215
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2
Other DBs
NCBI-ProteinID: APA69234
UniProt: A0A1I9XZP2
LinkDB
Position
3992120..3993346
AA seq 408 aa
MRLLHTSDWHLGQTLHNHERGYEHQRFLDWLLDTLVAERVDVLLVAGDVFDNANPSAASQ
KQLYVFLQQARARLPALQLVVVAGNHDSAGRLEAPSPLLAAHGTHVIGHLLRDENGEIDL
ERLLLPLADSDGKVQAWCLAVPFLRPGDVPKLPAGDSQDAYLGGIALLYRQLADLALARR
QPGQALIAMGHCHMVGGEMSNDSERRIVIGGTEMLPSGIFDASIAYAALGHLHKAQAVGG
QAHIRYCGSPIPLSFAEVNYRHQVLCLDVDGEQLQSVRAIDVPRAVPLLRVPATPAPLDE
VLAQLAALDVPAAPPEAQPFLEVRVRLDAPEPGLRTRIETALDGKSVRLAKIETSSAARS
SAPESMTLDQLGQLQPDDIFRRLYQQKYAKEAPPELLSALAELLLPGA
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgcgcctgctgcacacctccgactggcatctgggccagaccctgcataaccacgagcgg
ggctacgaacaccagcgcttcctcgactggctgctcgacaccctcgtggccgaacgggtc
gacgtgctgctggtggccggcgacgtgttcgacaacgccaacccgtcggccgcctcgcaa
aagcagctgtacgtgttcctgcagcaggcgcgcgcgcggctgcccgcgctgcagctggtc
gtcgtcgccggcaaccacgattcggcgggacggctggaagcgccctcccccttgctggcc
gcgcatggcacgcacgtgatcggccacctgctgcgcgacgaaaatggcgagatcgacctg
gaacgcctgttgctgccgctcgccgacagcgatggcaaggtgcaggcctggtgcctggcc
gtgcccttcctgcgccccggcgacgtgccgaaactgccggccggcgactcccaggacgcc
tatctgggcggcatcgccctgctgtaccgccagctggcggacctggcgctggcgcgccgc
cagcccggacaagccctcatcgccatgggccattgccacatggtgggcggcgaaatgtcg
aacgactccgaacgccgcatcgtcatcggcggcaccgagatgctgccgtcggggatcttc
gacgcctccatcgcgtatgcggcgctgggccacctgcacaaggcgcaagccgtgggcggg
caggcgcatatccgctattgcggcagcccgatcccgctctccttcgcggaagtcaactac
cggcatcaagtactgtgcctcgacgtcgacggcgaacagctgcagtccgtgcgcgccatc
gacgtgccgcgcgccgtgcccctgctgcgcgtgcctgccacgccggcgccgctagacgag
gtgctggcgcagctggccgccctcgacgtgcccgccgcgccaccggaagcgcaaccgttt
ctcgaagtgcgcgtgcgcctggacgcgcccgagccgggcctgcgcacgcgcatcgagacg
gccctcgacggcaagagcgtgcgcctggcaaagatcgaaacgtcgagcgccgcgcgcagc
agcgcgccggaaagcatgaccctcgaccagctgggccagctgcagcccgacgacatcttc
cgccgcctgtaccagcaaaaatacgccaaggaagcaccgcccgaactcctctcggccctg
gccgaactgctgctgcccggcgcttga

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